Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG289_RS29070 Genome accession   NZ_CP108513
Coordinates   6494396..6495520 (-) Length   374 a.a.
NCBI ID   WP_327316997.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01235     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6489396..6500520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG289_RS29045 (OG289_29070) cseB 6489778..6490479 (-) 702 WP_327316993.1 two-component system response regulator CseB -
  OG289_RS29050 (OG289_29075) - 6490763..6491422 (-) 660 WP_327316994.1 hypothetical protein -
  OG289_RS29055 (OG289_29080) - 6491407..6491949 (-) 543 WP_069773156.1 SigE family RNA polymerase sigma factor -
  OG289_RS29060 (OG289_29085) - 6492323..6493255 (-) 933 WP_327316995.1 A/G-specific adenine glycosylase -
  OG289_RS29065 (OG289_29090) - 6493512..6494324 (+) 813 WP_327316996.1 hypothetical protein -
  OG289_RS29070 (OG289_29095) disA 6494396..6495520 (-) 1125 WP_327316997.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG289_RS29075 (OG289_29100) radA/sms 6495601..6497010 (-) 1410 WP_327316998.1 DNA repair protein RadA Machinery gene
  OG289_RS29080 (OG289_29105) - 6497275..6499041 (+) 1767 WP_327317000.1 hypothetical protein -
  OG289_RS29085 (OG289_29110) - 6499180..6499965 (-) 786 WP_327320833.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40089.92 Da        Isoelectric Point: 5.0025

>NTDB_id=661998 OG289_RS29070 WP_327316997.1 6494396..6495520(-) (disA) [Streptomyces sp. NBC_01235]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDRTVEAMCTGGFVLNVEFAATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALYELDALTHAELLEMSTVARALGYTGSPEALDTAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=661998 OG289_RS29070 WP_327316997.1 6494396..6495520(-) (disA) [Streptomyces sp. NBC_01235]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTGCCGACGGCCTGATGCGTGCCGCGCT
GAGCGCGGTGGCTCCCGGCACGGCCCTGCGCGACGGCCTGGAGAGGATCCTCCGCGGCAACACCGGCGGTCTCATCGTGC
TGGGCTCCGACAGGACGGTCGAGGCGATGTGCACGGGCGGGTTCGTCCTGAACGTGGAGTTCGCGGCCACGCGCCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCCGACCTGTCGAAGATCCTCCGGGCCGGCGTCCAGCTCGTGCC
GGACCCCATGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCCATGCGCCTGATCGCCCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCCACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTGGCCCAGCGCCTGGAGATGGTCCGTCGCATCG
CCACCGAAATCGCGGAATACGTGGTCGAACTGGGCACGGACGGTCGTCTGCTCGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGCGAGCTGGTGGTCCGGGACTACGTTCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGAAGA
GGCGCTGTACGAGCTGGACGCGCTCACCCACGCCGAACTGCTCGAAATGTCCACGGTCGCCCGTGCGTTGGGCTACACCG
GCTCCCCCGAGGCCCTCGACACGGCGGTGTCCCCGCGCGGCTTCCGCCTGCTGGCCAAGGTGCCGCGCCTTCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGCGTGGGCGAGGCCAGGGCCCGGAGCGTCCGCGAGGGCCTGTCACGCCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438