Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MMZ10_RS16900 Genome accession   NZ_CP093151
Coordinates   3429636..3430232 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain CY814036     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3424636..3435232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMZ10_RS16885 (MMZ10_16885) helD 3424844..3426898 (-) 2055 WP_085855787.1 DNA helicase IV -
  MMZ10_RS16890 (MMZ10_16890) - 3427023..3427469 (+) 447 WP_002898425.1 YccF domain-containing protein -
  MMZ10_RS16895 (MMZ10_16895) yccS 3427487..3429622 (+) 2136 WP_049118083.1 YccS family putative transporter -
  MMZ10_RS16900 (MMZ10_16900) sxy/tfoX 3429636..3430232 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  MMZ10_RS16905 (MMZ10_16905) sulA 3430581..3431090 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  MMZ10_RS16910 (MMZ10_16910) ompA 3431443..3432513 (+) 1071 WP_002898408.1 porin OmpA -
  MMZ10_RS16915 (MMZ10_16915) matP 3432645..3433097 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  MMZ10_RS16920 (MMZ10_16920) - 3433283..3435040 (+) 1758 WP_016529118.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=661990 MMZ10_RS16900 WP_004179217.1 3429636..3430232(-) (sxy/tfoX) [Klebsiella pneumoniae strain CY814036]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=661990 MMZ10_RS16900 WP_004179217.1 3429636..3430232(-) (sxy/tfoX) [Klebsiella pneumoniae strain CY814036]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGATGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAAAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51