Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   MMZ59_RS05695 Genome accession   NZ_CP093150
Coordinates   1144561..1146387 (+) Length   608 a.a.
NCBI ID   WP_282959347.1    Uniprot ID   -
Organism   Bacillus altitudinis strain JYY-02     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1139561..1151387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMZ59_RS05675 (MMZ59_05675) - 1139823..1140488 (-) 666 WP_007499010.1 TerC family protein -
  MMZ59_RS05680 (MMZ59_05680) mecA 1140753..1141418 (+) 666 WP_008348474.1 adaptor protein MecA Regulator
  MMZ59_RS05685 (MMZ59_05685) cls 1141504..1143024 (+) 1521 WP_008348473.1 cardiolipin synthase -
  MMZ59_RS05690 (MMZ59_05690) - 1143084..1144346 (+) 1263 WP_196297674.1 competence protein CoiA -
  MMZ59_RS05695 (MMZ59_05695) pepF 1144561..1146387 (+) 1827 WP_282959347.1 oligoendopeptidase F Regulator
  MMZ59_RS05700 (MMZ59_05700) - 1146619..1146792 (-) 174 WP_048001688.1 hypothetical protein -
  MMZ59_RS05705 (MMZ59_05705) - 1147089..1148000 (-) 912 WP_007499002.1 ClpXP adapter SpxH family protein -
  MMZ59_RS05710 (MMZ59_05710) - 1147997..1148395 (-) 399 WP_007499001.1 thiol management oxidoreductase -
  MMZ59_RS05715 (MMZ59_05715) - 1148673..1149437 (-) 765 WP_008348461.1 lytic transglycosylase domain-containing protein -
  MMZ59_RS05720 (MMZ59_05720) - 1149463..1150038 (-) 576 WP_048001687.1 CYTH domain-containing protein -
  MMZ59_RS05725 (MMZ59_05725) - 1150256..1150621 (+) 366 WP_008348459.1 hypothetical protein -
  MMZ59_RS05730 (MMZ59_05730) - 1150655..1151284 (+) 630 WP_008348457.1 GTP pyrophosphokinase -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70313.97 Da        Isoelectric Point: 5.2858

>NTDB_id=661934 MMZ59_RS05695 WP_282959347.1 1144561..1146387(+) (pepF) [Bacillus altitudinis strain JYY-02]
MTSQNNNNHLPDRSEVKEENKWRLEDIFESVDSWNKEFEAVKKEIPKLAQFKGKLAHSADVLYEALTFQDQLSEKLGKLY
TYAHMKYDEDTTNSSFQALNDKASNLFTQLSSTSAYIVPEILSIQEDKLQQFILEKEELKLYSHALEEINKERPHILSEE
QEALLAEASEPLSTSSTTFSMFNNADISFPSVKDENGEEKKITHGNFITFLNSDDREVRKNAFKAVYKTYDQYKNTLAST
LSGSIKKDNFYAKVRHYKSAREAALSRNSIPEEVYDNLIDTVHQYLPLLHRYIELRKKVLKLDEVHNYDLYTPLVKDAGM
KLTYDEAKDYMLKGLAPLGEEYVSVLKEGLENRWVDVYENKGKRSGAYSSGSYGTNPYILMNWQNNIDNLFTLAHEFGHS
VHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLNHLEDKKQRLYVLNHLLEGFRGTVFRQTMFAEFEHLIHVKAQ
EGEALTPEFMTNLYYDLNKKYFGDGMVVDKEIGLEWTRIPHFYYNYYVYQYATGYSAAQALSKQILEEGKPAVERYTDFL
KAGSSDYPINVLKKAGVDMASKEPIEAACQLFEEKLKEMEELISKTSE

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=661934 MMZ59_RS05695 WP_282959347.1 1144561..1146387(+) (pepF) [Bacillus altitudinis strain JYY-02]
ATGACTTCACAAAATAACAACAATCATTTACCAGACAGAAGCGAAGTAAAAGAAGAAAACAAATGGCGCCTTGAAGATAT
TTTTGAAAGTGTCGATTCATGGAATAAGGAATTCGAAGCTGTAAAAAAAGAAATTCCGAAGCTCGCCCAATTTAAAGGCA
AGTTGGCCCATTCTGCTGATGTCTTGTATGAAGCCCTAACATTTCAGGATCAACTTTCTGAAAAGCTTGGCAAGCTTTAT
ACATATGCGCACATGAAATACGATGAAGATACAACAAATTCATCATTTCAGGCTTTAAATGATAAAGCATCCAATTTATT
TACACAGCTGTCTAGTACATCTGCCTATATTGTTCCGGAAATTTTATCTATTCAAGAAGATAAGCTGCAGCAATTTATTT
TGGAAAAAGAAGAATTAAAACTTTATTCTCACGCTCTCGAAGAAATTAACAAAGAGCGTCCGCATATTTTAAGTGAGGAG
CAAGAAGCTTTATTAGCTGAAGCCTCTGAACCTTTATCAACATCATCCACTACGTTTAGTATGTTTAATAATGCAGATAT
TTCGTTTCCTTCTGTTAAGGATGAAAATGGAGAAGAAAAGAAAATTACTCATGGCAACTTCATTACCTTTTTAAACAGTG
ATGATCGTGAAGTGAGAAAGAATGCTTTTAAAGCCGTTTATAAAACGTATGATCAGTATAAGAATACTTTGGCGTCTACA
CTCAGCGGCTCGATTAAAAAGGATAATTTTTATGCGAAAGTACGTCATTACAAATCGGCAAGAGAAGCAGCGTTATCACG
AAATAGTATTCCTGAAGAAGTGTATGACAATCTAATTGATACAGTTCATCAATATTTACCGTTATTACATCGCTACATTG
AATTGCGTAAAAAGGTATTAAAGCTTGATGAAGTGCACAATTATGACTTGTATACACCATTAGTAAAAGATGCTGGCATG
AAGCTGACCTATGATGAAGCAAAGGATTATATGCTGAAAGGGTTAGCGCCATTAGGAGAAGAATATGTTTCGGTATTAAA
AGAGGGACTCGAAAATCGCTGGGTAGACGTTTATGAGAATAAAGGGAAACGAAGCGGCGCGTATTCTTCTGGAAGCTATG
GCACGAACCCTTATATCTTAATGAACTGGCAAAATAATATTGATAATTTATTTACGCTAGCTCATGAATTTGGTCACTCT
GTTCATAGCTACTATACAAGAAAGCATCAGCCATATCCGTACGGAAACTACAGCATTTTTGTAGCAGAAGTGGCTTCTAC
AACAAATGAAGCATTACTAGGTGAATATTTACTCAATCATTTAGAGGACAAAAAGCAGCGCTTGTATGTGCTCAATCACT
TGTTAGAAGGATTTAGAGGGACGGTATTCAGACAAACGATGTTTGCAGAGTTCGAGCACCTGATTCATGTGAAAGCGCAA
GAAGGGGAGGCACTAACGCCAGAGTTCATGACGAACCTGTATTACGACCTGAATAAGAAGTATTTTGGCGACGGTATGGT
TGTGGATAAGGAAATCGGATTAGAATGGACGCGAATTCCGCATTTCTATTACAACTATTATGTGTATCAATATGCGACAG
GCTATAGTGCGGCTCAGGCATTAAGTAAACAAATTTTAGAAGAAGGGAAACCTGCAGTGGAGCGCTATACAGACTTCCTT
AAAGCAGGAAGCTCTGACTATCCAATCAACGTGCTGAAAAAAGCTGGTGTAGATATGGCATCAAAAGAACCAATTGAGGC
AGCATGTCAATTGTTTGAAGAAAAATTAAAGGAAATGGAAGAGCTCATCTCAAAGACTAGTGAGTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(211-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.158

97.697

0.48