Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MMZ59_RS05190 Genome accession   NZ_CP093150
Coordinates   1038075..1039025 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain JYY-02     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1033075..1044025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMZ59_RS05170 (MMZ59_05170) - 1034311..1034793 (+) 483 WP_007499155.1 hypothetical protein -
  MMZ59_RS05175 (MMZ59_05175) - 1034824..1036263 (-) 1440 WP_171465157.1 PLP-dependent aminotransferase family protein -
  MMZ59_RS05180 (MMZ59_05180) - 1036407..1037576 (+) 1170 WP_048001723.1 MFS transporter -
  MMZ59_RS05185 (MMZ59_05185) - 1037639..1037917 (+) 279 WP_017366963.1 barstar family protein -
  MMZ59_RS05190 (MMZ59_05190) ceuB 1038075..1039025 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  MMZ59_RS05195 (MMZ59_05195) - 1039018..1039968 (+) 951 WP_019743340.1 iron chelate uptake ABC transporter family permease subunit -
  MMZ59_RS05200 (MMZ59_05200) - 1039959..1040717 (+) 759 WP_057079732.1 ABC transporter ATP-binding protein -
  MMZ59_RS05205 (MMZ59_05205) - 1040740..1041684 (+) 945 WP_241511834.1 siderophore ABC transporter substrate-binding protein -
  MMZ59_RS05210 (MMZ59_05210) - 1041823..1042779 (+) 957 WP_007499147.1 LCP family protein -
  MMZ59_RS05215 (MMZ59_05215) - 1042814..1043248 (-) 435 WP_017360225.1 hypothetical protein -
  MMZ59_RS05220 (MMZ59_05220) - 1043334..1043696 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=661926 MMZ59_RS05190 WP_017366964.1 1038075..1039025(+) (ceuB) [Bacillus altitudinis strain JYY-02]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=661926 MMZ59_RS05190 WP_017366964.1 1038075..1039025(+) (ceuB) [Bacillus altitudinis strain JYY-02]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGAGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494