Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG324_RS27745 Genome accession   NZ_CP108512
Coordinates   6090756..6091880 (-) Length   374 a.a.
NCBI ID   WP_327430648.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01236     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6085756..6096880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG324_RS27720 (OG324_27745) cseB 6086212..6086919 (-) 708 WP_327430643.1 two-component system response regulator CseB -
  OG324_RS27725 (OG324_27750) - 6086939..6087586 (-) 648 WP_327430644.1 hypothetical protein -
  OG324_RS27730 (OG324_27755) - 6087574..6088125 (-) 552 WP_327430645.1 SigE family RNA polymerase sigma factor -
  OG324_RS27735 (OG324_27760) - 6088423..6089328 (-) 906 WP_327430646.1 A/G-specific adenine glycosylase -
  OG324_RS27740 (OG324_27765) - 6089741..6090550 (+) 810 WP_327430647.1 hypothetical protein -
  OG324_RS27745 (OG324_27770) disA 6090756..6091880 (-) 1125 WP_327430648.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG324_RS27750 (OG324_27775) radA/sms 6091949..6093358 (-) 1410 WP_327430649.1 DNA repair protein RadA Machinery gene
  OG324_RS27755 (OG324_27780) - 6093555..6095324 (+) 1770 WP_327430650.1 hypothetical protein -
  OG324_RS27760 (OG324_27785) - 6095445..6096305 (-) 861 WP_327430651.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40238.98 Da        Isoelectric Point: 4.8595

>NTDB_id=661904 OG324_RS27745 WP_327430648.1 6090756..6091880(-) (disA) [Streptomyces sp. NBC_01236]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELDALSHPELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=661904 OG324_RS27745 WP_327430648.1 6090756..6091880(-) (disA) [Streptomyces sp. NBC_01236]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACAGCCCTGCGCGACGGGCTCGAGCGGATTCTCCGTGGCAACACGGGCGGACTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATTCTGCGGGCGGGAGTGCAGCTCGTGCC
CGACCCGACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTCTCCAAGCAGGTCGACTTCCCTG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAACTCCGCCTCGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTCGTCACCGTCCGCGACGTGTCGGCTGTCGCCCAGCGCCTGGAGATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTAGTCGAACTGGGCACCGACGGGCGTCTTCTCGCCCTCCAGCTGGACGAGTTGATCGCC
GGGGTCGAGCCCGAGCGCGAACTCGTCGTACGGGACTACGTGCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTCTCCGAACTGGACGCGCTCAGCCACCCGGAGCTCCTCGAACTCTCCACCGTGGCACGGGCGCTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCCGTCTCCCCGCGCGGCTTCCGCCTCCTCGCCAAGGTGCCGCGCCTGCCCGGCGCG
ATCATCGACCGCCTTGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCGGCCAGCGTGGACGACCTGCAGACGGTCGA
CGGGGTGGGCGAGGCGCGGGCGCGCAGTGTCCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATTCTGGAACGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436