Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SRT_RS08240 Genome accession   NZ_AP014612
Coordinates   1709119..1709844 (-) Length   241 a.a.
NCBI ID   WP_128833735.1    Uniprot ID   A0A1L7LL70
Organism   Streptococcus troglodytae strain TKU 31     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1704119..1714844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SRT_RS08205 (SRT_16870) rnpM 1704291..1704587 (-) 297 WP_128833731.1 RNase P modulator RnpM -
  SRT_RS08210 (SRT_16880) nusA 1704605..1705798 (-) 1194 WP_128833732.1 transcription termination factor NusA -
  SRT_RS08215 (SRT_16890) rimP 1705834..1706328 (-) 495 WP_128834064.1 ribosome maturation factor RimP -
  SRT_RS08225 (SRT_16900) trmB 1706597..1707232 (-) 636 WP_128833733.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SRT_RS08230 (SRT_16910) ccrZ 1707242..1708024 (-) 783 WP_128833734.1 cell cycle regulator CcrZ -
  SRT_RS08235 - 1708082..1709116 (-) 1035 Protein_1614 ABC transporter permease -
  SRT_RS08240 (SRT_16930) pptA 1709119..1709844 (-) 726 WP_128833735.1 ABC transporter ATP-binding protein Regulator
  SRT_RS08245 (SRT_16940) - 1709910..1710329 (+) 420 WP_128833736.1 HIT family protein -
  SRT_RS08250 (SRT_16950) - 1710326..1710619 (+) 294 WP_128833737.1 hypothetical protein -
  SRT_RS08255 (SRT_16960) brpA 1710787..1712031 (-) 1245 WP_128834065.1 biofilm formation/cell division transcriptional regulator BrpA -
  SRT_RS08260 (SRT_16970) tsaE 1712363..1712806 (-) 444 WP_128833738.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SRT_RS08265 (SRT_16980) - 1712934..1714364 (-) 1431 WP_128833739.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26771.32 Da        Isoelectric Point: 4.8698

>NTDB_id=66186 SRT_RS08240 WP_128833735.1 1709119..1709844(-) (pptA) [Streptococcus troglodytae strain TKU 31]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFLIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQANLNDIYMTLTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=66186 SRT_RS08240 WP_128833735.1 1709119..1709844(-) (pptA) [Streptococcus troglodytae strain TKU 31]
ATGTTAAAAATAGAAAATTTGACCGGCGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAATTGGTCGGTCTTATCGGTCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAACCTT
ATGAAGGCAAAATCAGTATTGATGGGTTGACGCTTGCTGATCAAGAGATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACACCTAGTCTTTATGAGGAATTAACCTTAAAAGAGCACTTGGAAATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCCATTCATTTTT
CAAAGGGAATGAAGCAAAAGGTCATGATTATCTGTGCATTTCTCATTGATCCCAGTCTTTTTATTGTTGATGAACCTTTT
TTGGGATTGGATCCTGTTGCCATTTCAGATCTGACTCAGCTTTTGGCAGCAGAAAAAGCTAAAGGAAAATCCATTTTGAT
GTCAACGCATGTTCTCGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAACCTTAACGATATCTATATGACTTTGACTAAAGAG
GATTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L7LL70

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.151

99.17

0.755
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751

Multiple sequence alignment