Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   MM522_RS05355 Genome accession   NZ_CP093067
Coordinates   1010961..1011536 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATC-3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1005961..1016536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM522_RS05325 (MM522_05325) dapD 1006149..1006859 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  MM522_RS05330 (MM522_05330) dapI 1006929..1008053 (+) 1125 WP_038428899.1 N-acetyldiaminopimelate deacetylase -
  MM522_RS05335 (MM522_05335) ykuS 1008115..1008360 (+) 246 WP_003232382.1 YkuS family protein -
  MM522_RS05340 (MM522_05340) mscT 1008397..1009200 (-) 804 WP_029317733.1 small-conductance mechanosensitive channel protein MscT -
  MM522_RS05345 (MM522_05345) ahpA 1009437..1009979 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  MM522_RS05350 (MM522_05350) ykuV 1010049..1010495 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  MM522_RS05355 (MM522_05355) rok 1010961..1011536 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  MM522_RS05360 (MM522_05360) cse15 1011577..1012542 (-) 966 WP_029317734.1 spore protein Cse15 -
  MM522_RS05365 (MM522_05365) mobA 1012679..1013278 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  MM522_RS05370 (MM522_05370) moeB 1013329..1014348 (+) 1020 WP_029317735.1 molybdopterin-synthase adenylyltransferase MoeB -
  MM522_RS05375 (MM522_05375) glp 1014366..1015658 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  MM522_RS05380 (MM522_05380) mobB 1015619..1016140 (+) 522 WP_015252182.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=661831 MM522_RS05355 WP_003232378.1 1010961..1011536(+) (rok) [Bacillus subtilis strain ATC-3]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=661831 MM522_RS05355 WP_003232378.1 1010961..1011536(+) (rok) [Bacillus subtilis strain ATC-3]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1