Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MM522_RS05255 Genome accession   NZ_CP093067
Coordinates   995081..995545 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain ATC-3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 990081..1000545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM522_RS05235 (MM522_05235) kinA 990548..992368 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  MM522_RS05240 (MM522_05240) dapX 992378..993559 (-) 1182 WP_014476653.1 aminotransferase A -
  MM522_RS05245 (MM522_05245) - 993761..993922 (-) 162 WP_003245246.1 hypothetical protein -
  MM522_RS05250 (MM522_05250) cheV 994126..995037 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  MM522_RS05255 (MM522_05255) kre 995081..995545 (-) 465 WP_003232406.1 YkyB family protein Regulator
  MM522_RS05260 (MM522_05260) ykuC 995671..996963 (-) 1293 WP_029727007.1 MFS transporter -
  MM522_RS05265 (MM522_05265) ltdD 997039..997533 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  MM522_RS05270 (MM522_05270) ppeE 997585..998448 (-) 864 WP_029727008.1 metallophosphoesterase -
  MM522_RS05275 (MM522_05275) fadH 998591..999355 (+) 765 WP_029317730.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=661830 MM522_RS05255 WP_003232406.1 995081..995545(-) (kre) [Bacillus subtilis strain ATC-3]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=661830 MM522_RS05255 WP_003232406.1 995081..995545(-) (kre) [Bacillus subtilis strain ATC-3]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1