Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   MM522_RS03895 Genome accession   NZ_CP093067
Coordinates   749166..750317 (+) Length   383 a.a.
NCBI ID   WP_029317613.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATC-3     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 744166..755317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM522_RS03860 (MM522_03860) yjbB 744839..746056 (+) 1218 WP_101172486.1 MFS transporter -
  MM522_RS03865 (MM522_03865) yjbC 746220..746798 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  MM522_RS03870 (MM522_03870) spx 746979..747374 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  MM522_RS03875 (MM522_03875) yjbE 747417..748073 (-) 657 WP_003232944.1 TerC family protein -
  MM522_RS03880 (MM522_03880) - 748242..748382 (+) 141 WP_119122854.1 hypothetical protein -
  MM522_RS03885 (MM522_03885) mecA 748349..749005 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  MM522_RS03890 (MM522_03890) - 749000..749122 (-) 123 WP_128473814.1 hypothetical protein -
  MM522_RS03895 (MM522_03895) coiA 749166..750317 (+) 1152 WP_029317613.1 competence protein CoiA Machinery gene
  MM522_RS03900 (MM522_03900) pepF 750547..752376 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  MM522_RS03905 (MM522_03905) - 752414..752581 (-) 168 WP_003244944.1 hypothetical protein -
  MM522_RS03910 (MM522_03910) spxH 752895..753794 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  MM522_RS03915 (MM522_03915) yjbI 753791..754189 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  MM522_RS03920 (MM522_03920) cwlQ 754444..755178 (-) 735 WP_029317614.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44859.96 Da        Isoelectric Point: 9.9417

>NTDB_id=661826 MM522_RS03895 WP_029317613.1 749166..750317(+) (coiA) [Bacillus subtilis strain ATC-3]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPEGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=661826 MM522_RS03895 WP_029317613.1 749166..750317(+) (coiA) [Bacillus subtilis strain ATC-3]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTTGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCAGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGAAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963