Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   MM522_RS03770 Genome accession   NZ_CP093067
Coordinates   725914..726867 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain ATC-3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 720914..731867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM522_RS03745 (MM522_03745) argF 722746..723705 (+) 960 WP_014476421.1 ornithine carbamoyltransferase -
  MM522_RS03750 (MM522_03750) yjzC 723791..723970 (+) 180 WP_003245356.1 YjzC family protein -
  MM522_RS03755 (MM522_03755) yjzD 724017..724202 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  MM522_RS03760 (MM522_03760) - 724451..725185 (+) 735 WP_032721340.1 hypothetical protein -
  MM522_RS03765 (MM522_03765) - 725267..725824 (+) 558 WP_101172488.1 hypothetical protein -
  MM522_RS03770 (MM522_03770) med 725914..726867 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  MM522_RS03775 (MM522_03775) comZ 726882..727073 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  MM522_RS03780 (MM522_03780) yjzB 727103..727333 (-) 231 WP_080265337.1 spore coat protein YjzB -
  MM522_RS03785 (MM522_03785) fabH 727498..728436 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  MM522_RS03790 (MM522_03790) fabF 728459..729700 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  MM522_RS03795 (MM522_03795) yjaZ 729776..730561 (+) 786 WP_069322523.1 DUF2268 domain-containing protein -
  MM522_RS03800 (MM522_03800) appD 730753..731739 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=661821 MM522_RS03770 WP_014476425.1 725914..726867(+) (med) [Bacillus subtilis strain ATC-3]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=661821 MM522_RS03770 WP_014476425.1 725914..726867(+) (med) [Bacillus subtilis strain ATC-3]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997