Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MM522_RS02250 Genome accession   NZ_CP093067
Coordinates   444736..445530 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain ATC-3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 439736..450530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MM522_RS02220 (MM522_02220) sxzA 440575..441606 (+) 1032 WP_029317459.1 iron ABC transporter permease -
  MM522_RS02225 (MM522_02225) yfhB 441721..442602 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  MM522_RS02230 (MM522_02230) yfhC 442690..443274 (+) 585 WP_003243940.1 nitroreductase -
  MM522_RS02235 (MM522_02235) yfhD 443313..443504 (-) 192 WP_003233561.1 YfhD family protein -
  MM522_RS02240 (MM522_02240) yfhE 443571..443681 (-) 111 WP_003223230.1 YfhE family protein -
  MM522_RS02245 (MM522_02245) yfhF 443736..444647 (-) 912 WP_029317458.1 TIGR01777 family oxidoreductase -
  MM522_RS02250 (MM522_02250) recX 444736..445530 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  MM522_RS02255 (MM522_02255) yfhH 445532..445846 (+) 315 WP_003244592.1 YfhH family protein -
  MM522_RS02260 (MM522_02260) yfhI 445989..447182 (+) 1194 WP_029317457.1 MFS transporter -
  MM522_RS02265 (MM522_02265) sspK 447214..447366 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  MM522_RS02270 (MM522_02270) yfhJ 447491..447760 (+) 270 WP_003243789.1 YfhJ family protein -
  MM522_RS02275 (MM522_02275) yfhK 447905..448423 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  MM522_RS02280 (MM522_02280) spdL 448508..448825 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  MM522_RS02285 (MM522_02285) ephM 448827..449687 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=661814 MM522_RS02250 WP_003243354.1 444736..445530(+) (recX) [Bacillus subtilis strain ATC-3]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=661814 MM522_RS02250 WP_003243354.1 444736..445530(+) (recX) [Bacillus subtilis strain ATC-3]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTTATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1