Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG251_RS17165 Genome accession   NZ_CP108508
Coordinates   3881302..3882426 (+) Length   374 a.a.
NCBI ID   WP_326678014.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01237     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3876302..3887426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG251_RS17150 (OG251_17170) - 3876858..3877712 (+) 855 WP_326678011.1 hypothetical protein -
  OG251_RS17155 (OG251_17175) - 3877775..3879637 (-) 1863 WP_326678012.1 hypothetical protein -
  OG251_RS17160 (OG251_17180) radA/sms 3879809..3881221 (+) 1413 WP_326678013.1 DNA repair protein RadA Machinery gene
  OG251_RS17165 (OG251_17185) disA 3881302..3882426 (+) 1125 WP_326678014.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG251_RS17170 (OG251_17190) - 3882762..3883562 (-) 801 WP_326681294.1 hypothetical protein -
  OG251_RS17175 (OG251_17195) - 3883792..3884694 (+) 903 WP_073719626.1 A/G-specific adenine glycosylase -
  OG251_RS17180 (OG251_17200) - 3884916..3885563 (+) 648 WP_326678015.1 SigE family RNA polymerase sigma factor -
  OG251_RS17185 (OG251_17205) - 3885551..3886297 (+) 747 WP_326678016.1 hypothetical protein -
  OG251_RS17190 (OG251_17210) cseB 3886400..3887113 (+) 714 WP_073719623.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40340.33 Da        Isoelectric Point: 4.9406

>NTDB_id=661813 OG251_RS17165 WP_326678014.1 3881302..3882426(+) (disA) [Streptomyces sp. NBC_01237]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACVFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELAVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=661813 OG251_RS17165 WP_326678014.1 3881302..3882426(+) (disA) [Streptomyces sp. NBC_01237]
GTGGCAGCCAACGACCGGGCGGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGCAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCGCCCGGAATGGCCTTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAATACCGGTGGACTGATCGTCC
TCGGTATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTGCC
GGACGCGTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGGCGTGCGTCTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTTGAGGAGTCCTCCGCG
ATCCTGTCCCGGGCCAATCAGGCGCTCGCGACGCTGGAACGGTACAAACTGCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTCGCCCAGCGCCTGGAGATGGTGCGCAGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGGCGGCTGCTCTCGCTCCAGCTGGACGAGCTGATCGCG
GGTGTCGAGCCTGAGCGGGAACTGGTCGTGCGTGACTATGTGCCGGAGCCGACGGCCAAGCGGTCCCGCACGGTCGCGGA
GGCGCTGACCGAGCTGGACGCGCTGAGCCACACGGAGCTGCTGGAACTGGCCGTGGTGGCACGGGCGTTGGGGTACAGCG
GCTCGCCGGAGACGCTGGACTCGGCGGTGTCCCCGCGGGGATTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGAGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTGGCCGCGAGCGTGGACGATCTCCAGACCGTGGA
CGGTGTCGGGGAGGCCAGGGCGCGGAGCGTGCGGGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433