Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG466_RS22320 Genome accession   NZ_CP108497
Coordinates   4872716..4873840 (-) Length   374 a.a.
NCBI ID   WP_266746940.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01240     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4867716..4878840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG466_RS22295 (OG466_22315) - 4868307..4868975 (-) 669 WP_266746945.1 hypothetical protein -
  OG466_RS22300 (OG466_22320) - 4869032..4869682 (-) 651 WP_266746944.1 SigE family RNA polymerase sigma factor -
  OG466_RS22305 (OG466_22325) - 4869856..4870758 (-) 903 WP_266746943.1 A/G-specific adenine glycosylase -
  OG466_RS22310 (OG466_22330) - 4870914..4871597 (-) 684 WP_266746942.1 phosphatase PAP2 family protein -
  OG466_RS22315 (OG466_22335) - 4871771..4872580 (+) 810 WP_266746941.1 hypothetical protein -
  OG466_RS22320 (OG466_22340) disA 4872716..4873840 (-) 1125 WP_266746940.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG466_RS22325 (OG466_22345) radA/sms 4873921..4875333 (-) 1413 WP_266906265.1 DNA repair protein RadA Machinery gene
  OG466_RS22330 (OG466_22350) - 4875498..4877456 (+) 1959 WP_266746938.1 hypothetical protein -
  OG466_RS22335 (OG466_22355) - 4877539..4878381 (-) 843 WP_266746937.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40379.30 Da        Isoelectric Point: 4.9372

>NTDB_id=661753 OG466_RS22320 WP_266746940.1 4872716..4873840(-) (disA) [Streptomyces sp. NBC_01240]
MAASDRAASPGKSGQGTGNETLMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=661753 OG466_RS22320 WP_266746940.1 4872716..4873840(-) (disA) [Streptomyces sp. NBC_01240]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGACGCTGATGCGCGCCTCATT
GAGTGCCGTCGCGCCCGGAATGGCGCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAATACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACCGCGACGCGCCTGCGG
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCCGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTCGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAATCAGGCACTCGCCACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCACAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTGGAGTTGGGCACCGACGGCCGGCTTCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCCGA
GGCGCTGACCGAGCTCGATGCGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCAAGGGCACTGGGGTACAGCG
GCTCGCCGGAAACGCTGGATTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCC
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCCAGCGTGGACGACCTCCAGACGGTCGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGACTGTCACGGCTGGCCGAGTCGTCGATCCTCGAACGGTACG
TATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436