Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG348_RS21960 Genome accession   NZ_CP108491
Coordinates   4880130..4881254 (-) Length   374 a.a.
NCBI ID   WP_093547386.1    Uniprot ID   A0ABW1GGD3
Organism   Streptomyces sp. NBC_01243     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4875130..4886254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG348_RS21935 (OG348_21920) - 4875798..4876442 (-) 645 WP_241196520.1 hypothetical protein -
  OG348_RS21940 (OG348_21925) - 4876529..4877143 (-) 615 WP_124719463.1 SigE family RNA polymerase sigma factor -
  OG348_RS21945 (OG348_21930) - 4877320..4878222 (-) 903 WP_124719462.1 A/G-specific adenine glycosylase -
  OG348_RS21950 (OG348_21935) - 4878367..4879014 (-) 648 WP_266492542.1 phosphatase PAP2 family protein -
  OG348_RS21955 (OG348_21940) - 4879266..4880024 (+) 759 WP_266500203.1 hypothetical protein -
  OG348_RS21960 (OG348_21945) disA 4880130..4881254 (-) 1125 WP_093547386.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG348_RS21965 (OG348_21950) radA/sms 4881335..4882747 (-) 1413 WP_124719461.1 DNA repair protein RadA Machinery gene
  OG348_RS21970 (OG348_21955) - 4882943..4884856 (+) 1914 WP_266492548.1 hypothetical protein -
  OG348_RS21975 (OG348_21960) - 4884963..4885832 (-) 870 WP_327310911.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40376.30 Da        Isoelectric Point: 4.9372

>NTDB_id=661595 OG348_RS21960 WP_093547386.1 4880130..4881254(-) (disA) [Streptomyces sp. NBC_01243]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=661595 OG348_RS21960 WP_093547386.1 4880130..4881254(-) (disA) [Streptomyces sp. NBC_01243]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTCATGCGCGCCTCCCT
GAGCGCCGTGGCGCCCGGAATGGCGCTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGCGGACTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACCGCGACCCGCCTGCGC
GAGCTGGCCAAGCTCGACGGCGCGCTGATCCTCGACAAGGACATGACGAAGATCCTGCGCGCCGGCGTGCAGCTGGTGCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAATTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGCCTGATCGCGCTCTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGCCGGCTTCTCTCGCTCCAGCTGGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAGCTGGTGGTGCGCGACTACGTGCCGGAGCCGACCGCCAAGCGGTCCCGCACGGTCGCCGA
GGCGCTGACCGAGCTGGACGCGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCGCGGGCCCTGGGCTACAGCG
GCTCGCCCGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGATTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGGCTGTCCCGGCTGGCCGAGTCGTCGATCCTCGAACGCTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436