Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG408_RS17365 Genome accession   NZ_CP108472
Coordinates   4064983..4066107 (+) Length   374 a.a.
NCBI ID   WP_266780013.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01257     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4059983..4071107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG408_RS17350 (OG408_17380) - 4060400..4061239 (+) 840 WP_266780010.1 hypothetical protein -
  OG408_RS17355 (OG408_17385) - 4061277..4063148 (-) 1872 WP_266780011.1 hypothetical protein -
  OG408_RS17360 (OG408_17390) radA/sms 4063401..4064813 (+) 1413 WP_326670695.1 DNA repair protein RadA Machinery gene
  OG408_RS17365 (OG408_17395) disA 4064983..4066107 (+) 1125 WP_266780013.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG408_RS17370 (OG408_17400) - 4066163..4066960 (-) 798 WP_326674554.1 hypothetical protein -
  OG408_RS17375 (OG408_17405) - 4067365..4068267 (+) 903 WP_266780014.1 A/G-specific adenine glycosylase -
  OG408_RS17380 (OG408_17410) - 4068492..4069136 (+) 645 WP_266780015.1 SigE family RNA polymerase sigma factor -
  OG408_RS17385 (OG408_17415) - 4069124..4069867 (+) 744 WP_266780016.1 hypothetical protein -
  OG408_RS17390 (OG408_17420) cseB 4069878..4070579 (+) 702 WP_266780017.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40291.19 Da        Isoelectric Point: 4.8613

>NTDB_id=661328 OG408_RS17365 WP_266780013.1 4064983..4066107(+) (disA) [Streptomyces sp. NBC_01257]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASISTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRLIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=661328 OG408_RS17365 WP_266780013.1 4064983..4066107(+) (disA) [Streptomyces sp. NBC_01257]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGAGGCCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAATTCACCGCGACCCGGCTGCGT
GAGCTCGCCAAGCTCGACGGGGCTCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACGCCTCGATCTCCACCGAGGAGACGGGCACCCGCCACCGCACGGCGGACCGAGTCTCCAAGCAGTGCAACTTCCCCG
TGGTCTCCGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGGGCCAACCAGGCTCTCGCCACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTCGCCCAGCGGCTGGAGATGGTCCGGCTGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACCGACGGCCGCCTTCTCTCGCTCCAGCTTGACGAGTTGATCGCC
GGGGTCGAGCCGGAGCGCGAGCTGGTGGTGCGCGACTACGTGCCGGAGCCGACGGCGAAGCGCTCGCGCACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTGTCCCACACCGAGCTGCTCGAACTCCCGGTGGTGGCAAGGGCGCTGGGGTACAGCG
GCTCCCCGGAGACCCTCGACTCGGCGGTGTCGCCGCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCCAGCGTGGACGATCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGGGCGCGCAGTGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436