Detailed information NTG0661302

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG408_RS04150
• Genome accession: NZ_CP108472
• Coordinates: 939118..940140 (-)
• Length: 340 a.a.
• NCBI ID: WP_285570480.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01257
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 934118..945140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG408_RS04125 (OG408_04150)	-	934162..935685 (-)	1524	WP_326668266.1	catalase	-
OG408_RS04130 (OG408_04155)	-	935894..936382 (+)	489	WP_266775497.1	flavin reductase family protein	-
OG408_RS04135 (OG408_04160)	-	936423..936551 (-)	129	WP_266775499.1	LPFR motif small protein	-
OG408_RS04140 (OG408_04165)	-	936796..937224 (+)	429	WP_285570476.1	polyketide cyclase	-
OG408_RS04145 (OG408_04170)	-	937355..938443 (-)	1089	WP_326668270.1	lytic polysaccharide monooxygenase	-
OG408_RS04150 (OG408_04175)	cytR	939118..940140 (-)	1023	WP_285570480.1	LacI family DNA-binding transcriptional regulator	Regulator
OG408_RS04155 (OG408_04180)	-	940610..941986 (+)	1377	WP_326668273.1	cellulase family glycosylhydrolase	-
OG408_RS04160 (OG408_04185)	-	942154..943305 (+)	1152	WP_326668276.1	HEAT repeat domain-containing protein	-
OG408_RS04165 (OG408_04190)	-	943452..943631 (-)	180	Protein_830	hypothetical protein	-
OG408_RS04170 (OG408_04195)	-	943697..944443 (-)	747	WP_266775511.1	DUF2071 domain-containing protein	-
OG408_RS04175 (OG408_04200)	-	944440..944772 (-)	333	WP_266775513.1	metalloregulator ArsR/SmtB family transcription factor	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 36647.00 Da
• Isoelectric Point: 6.8875

>NTDB_id=661302 OG408_RS04150 WP_285570480.1 939118..940140(-) (cytR) [Streptomyces sp. NBC_01257]
MLKRSSGTPTLEEVAALAGVGRGTVSRVINNASGVKASTRRTVLRAIDELDYVPNLAARSLAGRRADAVALVMTKADWRL
FGEPFFSEVVRAVGDALAEVDVQLLLTLVRTDAERQRLVKYVRGGRVDGVLLMSMRAEDRLPDMLADAGVPTVLLGRRSG
EERVTYVDADNVGGARAAVGHLTRGGRKVIAAITGPPEMYVAQCRLRGYREALGDAGLDEVPSLVVQGDFSEASGRRAMT
GLIERHPEVDAVFAASDSMAAGALAALHAAGRRVPQDVAVIGFDDFELAEQTEPSLTTVRQPMEEIGRTMVRLLLEEMGQ
PQVAWRHAILRTRLVVRESA

Nucleotide

• Length: 1023 bp

>NTDB_id=661302 OG408_RS04150 WP_285570480.1 939118..940140(-) (cytR) [Streptomyces sp. NBC_01257]
ATGCTGAAGCGAAGTTCCGGCACACCGACGCTGGAGGAAGTGGCCGCCCTTGCCGGTGTGGGGCGGGGCACGGTCTCCCG
AGTGATCAACAACGCGTCGGGCGTCAAGGCGTCCACACGCCGTACCGTGCTGCGCGCCATCGACGAACTGGACTACGTGC
CCAATCTGGCCGCGCGTTCACTGGCCGGGCGGCGCGCGGACGCCGTCGCCCTGGTGATGACGAAGGCGGACTGGCGGCTG
TTCGGCGAGCCGTTCTTCTCGGAGGTCGTACGGGCGGTCGGGGATGCCCTGGCCGAGGTGGACGTGCAGCTCCTGCTCAC
ACTGGTCCGCACGGACGCCGAGCGGCAGCGGCTCGTCAAGTACGTGCGCGGCGGCCGGGTCGACGGGGTGCTGCTGATGT
CCATGCGGGCCGAGGACCGGCTGCCGGACATGCTCGCCGACGCCGGGGTGCCCACGGTGCTGCTGGGCAGGCGCTCGGGG
GAGGAGCGGGTGACCTACGTGGACGCGGACAACGTCGGCGGCGCTCGGGCCGCGGTCGGCCATCTGACGCGCGGCGGGCG
GAAGGTCATCGCCGCGATCACGGGCCCGCCCGAGATGTACGTCGCCCAGTGCAGGCTGCGCGGCTACCGGGAGGCGCTGG
GTGACGCCGGGCTCGACGAGGTGCCGTCGCTGGTCGTACAGGGAGATTTCAGCGAGGCCAGCGGGCGCCGGGCGATGACG
GGACTCATCGAGCGGCACCCGGAAGTCGACGCCGTCTTCGCCGCGTCGGACAGCATGGCCGCCGGAGCGCTTGCCGCCCT
GCATGCGGCGGGGCGCCGGGTGCCCCAGGACGTGGCGGTGATCGGCTTCGACGACTTCGAGCTGGCCGAGCAGACGGAAC
CGTCCCTGACGACCGTGCGTCAGCCGATGGAGGAGATCGGCCGGACCATGGTGCGGCTGCTGCTGGAGGAAATGGGCCAG
CCGCAGGTGGCCTGGCGTCATGCGATCCTCCGGACGCGGCTGGTGGTGCGCGAGTCGGCCTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (179-339)

• Bacterial regulatory proteins, lacI family (LacI) (10-55)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	35.632	100	0.365
cytR	Vibrio cholerae C6706	36.176	100	0.362