Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG226_RS14860 Genome accession   NZ_CP108463
Coordinates   3474477..3475256 (+) Length   259 a.a.
NCBI ID   WP_026151025.1    Uniprot ID   A0ABU4FGW0
Organism   Streptomyces sp. NBC_01261     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3469477..3480256
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG226_RS14850 (OG226_14810) - 3470302..3473196 (-) 2895 WP_328678079.1 vitamin B12-dependent ribonucleotide reductase -
  OG226_RS14855 (OG226_14815) nrdR 3473361..3473912 (-) 552 WP_328678080.1 transcriptional regulator NrdR -
  OG226_RS14860 (OG226_14820) dinR/lexA 3474477..3475256 (+) 780 WP_026151025.1 transcriptional repressor LexA Regulator
  OG226_RS14865 (OG226_14825) - 3475427..3477409 (-) 1983 WP_329349206.1 ATP-dependent DNA helicase -
  OG226_RS14870 (OG226_14830) - 3477887..3478852 (-) 966 WP_329349207.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 28037.72 Da        Isoelectric Point: 7.0668

>NTDB_id=661069 OG226_RS14860 WP_026151025.1 3474477..3475256(+) (dinR/lexA) [Streptomyces sp. NBC_01261]
MTTTADSATITAQDRSQGRLEPVHAMNEAANPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSSVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLEGEATVKRFKREDGHVWLLPHNSAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=661069 OG226_RS14860 WP_026151025.1 3474477..3475256(+) (dinR/lexA) [Streptomyces sp. NBC_01261]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGATCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCAATGAA
CGAAGCCGCGAATCCCGAGGGACACAAGCGCTCCCTGCCGGGCCGACCTCCCGGTATCCGGGCGGACAGCTCGGGGCTCA
CGGACCGGCAGCGCCGGGTGATCGAGGTCATCAGGGACTCGGTGCAGCGACGGGGTTACCCGCCGTCGATGCGCGAGATC
GGCCAGGCCGTGGGCCTGTCCAGCACGTCCTCGGTCGCACACCAGCTGATGGCACTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGCGCGTACGAGGTCCGCGGCAGCGACCAGTCCTCGTCGGTGCAGCCCACGGACACCGCGGGCA
AGCCCGCCGCGTCGTACGTCCCCCTGGTGGGCCGGATCGCCGCCGGTGGACCGATCCTCGCCGAGGAGTCGGTCGAGGAC
GTCTTCCCCCTCCCCCGCCAACTGGTCGGTGACGGTGAGCTGTTCGTCCTCAAGGTCGTCGGTGACTCGATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACCGTGCGCCGCCAGCCGGTCGCCGAGAACGGTGACATCGTGGCCGCCATGCTGG
AGGGCGAGGCCACCGTCAAACGCTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTCCCGCACAACTCGGCCTACGAGCCG
ATCCCCGGCGACGACGCGACGATCCTCGGCAAGGTGGTGGCAGTGCTGCGGCGCGTGTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(51-114)

Peptidase S24-like (Peptidase_S24)

(141-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375