Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MK744_RS03565 Genome accession   NZ_CP092907
Coordinates   737013..738686 (+) Length   557 a.a.
NCBI ID   WP_010825092.1    Uniprot ID   -
Organism   Enterococcus faecalis strain LJX 0909     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 732013..743686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK744_RS03535 (MK744_03535) - 732264..733109 (+) 846 WP_002355876.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  MK744_RS03540 (MK744_03540) xseA 733119..734465 (+) 1347 WP_002355877.1 exodeoxyribonuclease VII large subunit -
  MK744_RS03545 (MK744_03545) - 734467..734697 (+) 231 WP_002395761.1 exodeoxyribonuclease VII small subunit -
  MK744_RS03550 (MK744_03550) - 734697..735578 (+) 882 WP_002355879.1 polyprenyl synthetase family protein -
  MK744_RS03555 (MK744_03555) - 735592..736407 (+) 816 WP_141417206.1 TlyA family RNA methyltransferase -
  MK744_RS03560 (MK744_03560) - 736546..736995 (+) 450 WP_002358881.1 ArgR family transcriptional regulator -
  MK744_RS03565 (MK744_03565) recN 737013..738686 (+) 1674 WP_010825092.1 DNA repair protein RecN Machinery gene
  MK744_RS03570 (MK744_03570) - 738777..738887 (-) 111 WP_002383399.1 DUF4044 domain-containing protein -
  MK744_RS03575 (MK744_03575) - 738955..739920 (-) 966 WP_002390178.1 magnesium transporter CorA family protein -
  MK744_RS03580 (MK744_03580) - 740165..740557 (+) 393 WP_002383401.1 DUF3397 domain-containing protein -
  MK744_RS03585 (MK744_03585) mraZ 740790..741275 (+) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  MK744_RS03590 (MK744_03590) rsmH 741290..742246 (+) 957 WP_185938094.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  MK744_RS03595 (MK744_03595) ftsL 742263..742670 (+) 408 WP_002358883.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62655.07 Da        Isoelectric Point: 4.5772

>NTDB_id=661058 MK744_RS03565 WP_010825092.1 737013..738686(+) (recN) [Enterococcus faecalis strain LJX 0909]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTRAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDPEYKSLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=661058 MK744_RS03565 WP_010825092.1 737013..738686(+) (recN) [Enterococcus faecalis strain LJX 0909]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGTGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTGGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGAATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAATGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACGGGCATATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAGTTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGC
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAAATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATCCAGAATATAAATC
ATTGTCAGATACTGTTCAAAATGCCTACTACTTACTACAAGAAGCTAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGATGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGTGATTCG
ATCGAAACGATTTTATCTTACTATGAAGAAATCACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCGGCTCATCAACAAGCGTTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTTGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACTGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGCTGGCTATGAAAACAATCTTTTCTCAAACACAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTCAGTGGCCGAGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCCCAAGTGGCGGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATTGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501