Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG757_RS11035 Genome accession   NZ_CP108462
Coordinates   2396040..2396810 (+) Length   256 a.a.
NCBI ID   WP_329311616.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01262     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2391040..2401810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG757_RS11020 (OG757_11010) - 2391530..2391676 (-) 147 WP_329311613.1 hypothetical protein -
  OG757_RS11025 (OG757_11015) - 2392007..2394919 (-) 2913 WP_329311614.1 vitamin B12-dependent ribonucleotide reductase -
  OG757_RS11030 (OG757_11020) nrdR 2395042..2395557 (-) 516 WP_329311615.1 transcriptional regulator NrdR -
  OG757_RS11035 (OG757_11025) dinR/lexA 2396040..2396810 (+) 771 WP_329311616.1 transcriptional repressor LexA Regulator
  OG757_RS11040 (OG757_11030) - 2396891..2398897 (-) 2007 WP_329311617.1 ATP-dependent DNA helicase -
  OG757_RS11045 (OG757_11035) - 2398947..2400710 (-) 1764 WP_329311618.1 IucA/IucC family siderophore biosynthesis protein -
  OG757_RS11050 (OG757_11040) - 2400756..2401442 (-) 687 WP_329311619.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 27812.51 Da        Isoelectric Point: 7.4046

>NTDB_id=660971 OG757_RS11035 WP_329311616.1 2396040..2396810(+) (dinR/lexA) [Streptomyces sp. NBC_01262]
MTTTASSATLTAQDRSQDRLRPMDAMNDDTPKPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREIGQ
AVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDTSAVQPTDTAGKPSASYVPLVGRIAAGGPILAEESVEDVFP
LPRQLVGDGELFVLKVVGDSMTEAAIVDGDWVTVRRQQVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNSAYEPILG
DEATILGKVVAVLRRV

Nucleotide


Download         Length: 771 bp        

>NTDB_id=660971 OG757_RS11035 WP_329311616.1 2396040..2396810(+) (dinR/lexA) [Streptomyces sp. NBC_01262]
GTGACCACCACCGCAAGCAGCGCCACACTGACCGCCCAGGACCGCTCCCAGGACCGGCTACGCCCAATGGACGCGATGAA
CGACGACACACCCAAGCCCGCACGCTCGCTTCCCGGTCGACCTCCGGGCATCAGGGCGGACAGCTCCGGCCTGACCGATC
GCCAGCGCCGGGTCATCGAGGTGATCCGGGATTCCGTCCAGCGCCGCGGCTACCCACCGTCCATGCGCGAGATCGGCCAG
GCGGTGGGGCTGTCCAGCACCTCGTCGGTGGCCCACCAACTGATGGCCCTGGAGCGCAAGGGCTTCCTGCGCCGCGACCC
GCACCGGCCGCGCGCCTACGAGGTGCGCGGATCCGACACATCGGCGGTGCAGCCGACGGACACCGCCGGCAAGCCGTCCG
CCTCATACGTGCCGCTGGTCGGCCGGATCGCGGCCGGTGGCCCGATCCTGGCCGAGGAGTCGGTCGAGGATGTCTTTCCG
CTGCCGCGTCAGCTGGTCGGCGACGGCGAGCTCTTCGTGCTGAAGGTCGTCGGTGACTCGATGACGGAAGCGGCCATCGT
GGACGGCGACTGGGTCACCGTGCGCAGGCAGCAGGTCGCCGAGAACGGCGACATCGTCGCGGCGATGCTCGACGGCGAAG
CCACCGTCAAGCGCTTCAAGCGCGAGGACGGACACGTCTGGCTGCTGCCGCACAACTCCGCGTACGAGCCGATCCTCGGC
GACGAGGCGACCATCCTCGGCAAGGTGGTGGCGGTGTTGCGCCGGGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(49-112)

Peptidase S24-like (Peptidase_S24)

(138-250)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.714

82.031

0.375