Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ML603_RS09425 Genome accession   NZ_CP092887
Coordinates   1914786..1915499 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1909786..1920499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS09415 (ML603_09415) treC 1910856..1912484 (-) 1629 WP_241067213.1 alpha,alpha-phosphotrehalase -
  ML603_RS09420 (ML603_09420) treP 1912551..1914575 (-) 2025 WP_241067214.1 PTS system trehalose-specific EIIBC component -
  ML603_RS09425 (ML603_09425) treR 1914786..1915499 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  ML603_RS09430 (ML603_09430) - 1915781..1916119 (-) 339 WP_111717749.1 helix-turn-helix domain-containing protein -
  ML603_RS09435 (ML603_09435) - 1916305..1917159 (+) 855 WP_241067216.1 VOC family protein -
  ML603_RS09440 (ML603_09440) yaaA 1917201..1917932 (+) 732 WP_241067217.1 peroxide stress protein YaaA -
  ML603_RS09445 (ML603_09445) nrdG 1918104..1918718 (-) 615 WP_241067218.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ML603_RS09450 (ML603_09450) - 1918722..1919225 (-) 504 WP_143928073.1 GNAT family N-acetyltransferase -
  ML603_RS09455 (ML603_09455) - 1919234..1920169 (-) 936 WP_241067219.1 Gfo/Idh/MocA family oxidoreductase -
  ML603_RS09460 (ML603_09460) - 1920198..1920344 (-) 147 WP_241067220.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=660952 ML603_RS09425 WP_002982243.1 1914786..1915499(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=660952 ML603_RS09425 WP_002982243.1 1914786..1915499(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATCAACAAAGATTTTTACAAGGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGTTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTATCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATCTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
CAAAATTTTACTTGACCTTGGCTCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679