Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ML603_RS07745 Genome accession   NZ_CP092887
Coordinates   1574984..1575709 (-) Length   241 a.a.
NCBI ID   WP_192942317.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1569984..1580709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS07725 (ML603_07725) trmB 1570890..1571525 (-) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ML603_RS07730 (ML603_07730) - 1571525..1572316 (-) 792 WP_003052472.1 phosphotransferase family protein -
  ML603_RS07735 (ML603_07735) - 1572506..1573897 (+) 1392 WP_241067696.1 ISNCY family transposase -
  ML603_RS07740 (ML603_07740) - 1573920..1574981 (-) 1062 WP_241067010.1 ABC transporter permease -
  ML603_RS07745 (ML603_07745) pptA 1574984..1575709 (-) 726 WP_192942317.1 ABC transporter ATP-binding protein Regulator
  ML603_RS07750 (ML603_07750) - 1575781..1576200 (+) 420 WP_012767493.1 HIT family protein -
  ML603_RS07755 (ML603_07755) - 1576197..1576526 (+) 330 WP_143927873.1 chemotaxis protein -
  ML603_RS07760 (ML603_07760) - 1576684..1577952 (-) 1269 WP_192942318.1 LCP family protein -
  ML603_RS07765 (ML603_07765) - 1577964..1578485 (-) 522 WP_241067011.1 N-acetyltransferase -
  ML603_RS07770 (ML603_07770) tsaE 1578478..1578921 (-) 444 WP_143927875.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ML603_RS07775 (ML603_07775) - 1579102..1580562 (-) 1461 WP_154412113.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26400.65 Da        Isoelectric Point: 4.6450

>NTDB_id=660943 ML603_RS07745 WP_192942317.1 1574984..1575709(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLAADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=660943 ML603_RS07745 WP_192942317.1 1574984..1575709(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATCTCGATTGATGGACTAACCTTGGCTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTTGCTATGGCCTATGATATTGACGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATTTGTGCTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGCCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTACAGGATGCCTTTGGTGACGCTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751
  pptA Streptococcus thermophilus LMD-9

74.895

99.17

0.743