Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG709_RS20445 Genome accession   NZ_CP108455
Coordinates   4447912..4449036 (-) Length   374 a.a.
NCBI ID   WP_250305431.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01267     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4442912..4454036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG709_RS20415 (OG709_20425) cseB 4443079..4443777 (-) 699 WP_250305437.1 two-component system response regulator CseB -
  OG709_RS20420 (OG709_20430) - 4443790..4444533 (-) 744 WP_250305436.1 hypothetical protein -
  OG709_RS20425 (OG709_20435) - 4444521..4445072 (-) 552 WP_250305435.1 SigE family RNA polymerase sigma factor -
  OG709_RS20430 (OG709_20440) - 4445243..4446160 (-) 918 WP_266641522.1 A/G-specific adenine glycosylase -
  OG709_RS20435 (OG709_20445) - 4446177..4446785 (-) 609 WP_250305433.1 phosphatase PAP2 family protein -
  OG709_RS20440 (OG709_20450) - 4446960..4447805 (+) 846 WP_329167324.1 hypothetical protein -
  OG709_RS20445 (OG709_20455) disA 4447912..4449036 (-) 1125 WP_250305431.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG709_RS20450 (OG709_20460) radA/sms 4449081..4450490 (-) 1410 WP_250305430.1 DNA repair protein RadA Machinery gene
  OG709_RS20455 (OG709_20465) - 4450652..4452355 (+) 1704 WP_250305429.1 hypothetical protein -
  OG709_RS20460 (OG709_20470) - 4452409..4453215 (-) 807 WP_250305428.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40288.19 Da        Isoelectric Point: 5.0166

>NTDB_id=660923 OG709_RS20445 WP_250305431.1 4447912..4449036(-) (disA) [Streptomyces sp. NBC_01267]
MAANDRAAPGKSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALVELNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=660923 OG709_RS20445 WP_250305431.1 4447912..4449036(-) (disA) [Streptomyces sp. NBC_01267]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAAGTCCGGCGGGAGCTCCTCCGGCAATGAAGCGCTGATGCGCGCCACGCT
GAGCGCTGTCGCGCCCGGTACAGCGCTGCGCGACGGCCTGGAACGCATCCTTCGCGGGAACACCGGCGGCCTGATCGTCC
TGGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTCATGGACGTGGAGTTCGCCGCGACCCGCCTGCGC
GAGCTCTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGATCTCACCAAGATTCTGCGGGCCGGTGTCCAGCTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGTCACCGCACGGCCGACCGGGTCTCCAAACAGTGCGGTTTCCCGG
TCGTCTCGGTGTCGCAGTCGATGCATCTGATCGCGCTGTACGTCGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCACTGGCCACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCCGGCACGCTCTC
TGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCACGGCCGTGGCGCAGCGGCTGGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTCGACGAGCTGATCGCG
GGGGTCGAGCCGGAGCGGGAGCTGGTGGTCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCGCGCACGGTCGCCGA
GGCGCTGGTCGAGCTGAACACGCTCAGCCATACGGAACTTCTCGAACTGCCCGTCGTGGCACGGGCGTTGGGCTACAGCG
GCTCCCCCGAGACGCTCGACTCCGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGAGCG
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTGGCCGCGAGCGTCGACGATCTGCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCCCGGAGCGTGCGGGAGGGGCTGTCGCGGCTCGCGGAGTCCTCGATCCTTGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.328

94.652

0.439