Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ML603_RS02675 Genome accession   NZ_CP092887
Coordinates   507231..508040 (+) Length   269 a.a.
NCBI ID   WP_003059746.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 502231..513040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS02650 (ML603_02650) - 502604..503305 (-) 702 WP_138125099.1 amino acid ABC transporter permease -
  ML603_RS02655 (ML603_02655) - 503319..504119 (-) 801 WP_241067484.1 transporter substrate-binding domain-containing protein -
  ML603_RS02660 (ML603_02660) - 504119..504913 (-) 795 WP_003057217.1 amino acid ABC transporter ATP-binding protein -
  ML603_RS02665 (ML603_02665) vicR 505172..505882 (+) 711 WP_003049952.1 response regulator YycF Regulator
  ML603_RS02670 (ML603_02670) vicK 505875..507227 (+) 1353 WP_003049953.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ML603_RS02675 (ML603_02675) vicX 507231..508040 (+) 810 WP_003059746.1 MBL fold metallo-hydrolase Regulator
  ML603_RS02680 (ML603_02680) rnc 508313..509005 (+) 693 WP_003057240.1 ribonuclease III -
  ML603_RS02685 (ML603_02685) smc 509006..512551 (+) 3546 WP_241067485.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30157.38 Da        Isoelectric Point: 6.0739

>NTDB_id=660923 ML603_RS02675 WP_003059746.1 507231..508040(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=660923 ML603_RS02675 WP_003059746.1 507231..508040(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGATATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGTATCATGAAAGATAACAAATCGTTTGTAATGCTGACTGATACAGGTTATGTCAGCGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGTCATTTGAGTAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766