Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   M3B_RS02065 Genome accession   NZ_AP014596
Coordinates   399688..400413 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain M3-b     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 394688..405413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M3B_RS02035 (M3B_0415) - 394867..396327 (+) 1461 WP_011106621.1 NCS2 family permease -
  M3B_RS02040 (M3B_0416) tsaE 396481..396942 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  M3B_RS02045 (M3B_0417) - 396917..397441 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  M3B_RS02050 (M3B_0418) brpA 397450..398733 (+) 1284 WP_096404057.1 biofilm formation/cell division transcriptional regulator BrpA -
  M3B_RS02055 (M3B_0419) - 398844..399200 (-) 357 WP_002988657.1 hypothetical protein -
  M3B_RS02060 (M3B_0420) - 399197..399616 (-) 420 WP_002983376.1 HIT family protein -
  M3B_RS02065 (M3B_0421) pptA 399688..400413 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  M3B_RS02070 (M3B_0422) - 400416..401450 (+) 1035 WP_010922583.1 ABC transporter permease -
  M3B_RS02075 (M3B_0423) ccrZ 401514..402305 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  M3B_RS02080 (M3B_0424) trmB 402305..402940 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  M3B_RS02090 (M3B_0426) rimP 403199..403735 (+) 537 WP_011054929.1 ribosome maturation factor RimP -
  M3B_RS02095 (M3B_0427) nusA 403910..405067 (+) 1158 WP_002994325.1 transcription termination factor NusA -
  M3B_RS02100 (M3B_0428) rnpM 405083..405379 (+) 297 WP_002983486.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=66092 M3B_RS02065 WP_002983379.1 399688..400413(+) (pptA) [Streptococcus pyogenes strain M3-b]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=66092 M3B_RS02065 WP_002983379.1 399688..400413(+) (pptA) [Streptococcus pyogenes strain M3-b]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment