Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MLB75_RS15710 Genome accession   NZ_CP092861
Coordinates   3101324..3101929 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica strain P164045     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3096324..3106929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MLB75_RS15695 (MLB75_15695) helD 3096541..3098595 (-) 2055 WP_023228225.1 DNA helicase IV -
  MLB75_RS15700 (MLB75_15700) - 3098719..3099165 (+) 447 WP_001261222.1 YccF domain-containing protein -
  MLB75_RS15705 (MLB75_15705) yccS 3099184..3101337 (+) 2154 WP_000950881.1 YccS family putative transporter -
  MLB75_RS15710 (MLB75_15710) sxy/tfoX 3101324..3101929 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  MLB75_RS15715 (MLB75_15715) sulA 3102146..3102655 (+) 510 WP_241065631.1 SOS-induced cell division inhibitor SulA -
  MLB75_RS15720 (MLB75_15720) ompA 3103012..3104064 (+) 1053 WP_024136609.1 porin OmpA -
  MLB75_RS15725 (MLB75_15725) matP 3104136..3104588 (-) 453 WP_241065632.1 macrodomain Ter protein MatP -
  MLB75_RS15730 (MLB75_15730) - 3104774..3106534 (+) 1761 WP_000156448.1 Lon protease family protein -

Sequence

Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=660888 MLB75_RS15710 WP_001202375.1 3101324..3101929(-) (sxy/tfoX) [Salmonella enterica strain P164045]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=660888 MLB75_RS15710 WP_001202375.1 3101324..3101929(-) (sxy/tfoX) [Salmonella enterica strain P164045]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCCCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTTCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751