Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG309_RS28040 Genome accession   NZ_CP108454
Coordinates   6211165..6211953 (-) Length   262 a.a.
NCBI ID   WP_046911342.1    Uniprot ID   A0A2P2GEZ5
Organism   Streptomyces sp. NBC_01268     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6206165..6216953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG309_RS28025 (OG309_28025) - 6206529..6207158 (+) 630 WP_329428581.1 GNAT family N-acetyltransferase -
  OG309_RS28030 (OG309_28030) - 6207219..6209048 (+) 1830 WP_329424878.1 IucA/IucC family siderophore biosynthesis protein -
  OG309_RS28035 (OG309_28035) - 6209098..6211071 (+) 1974 WP_329424880.1 ATP-dependent DNA helicase -
  OG309_RS28040 (OG309_28040) dinR/lexA 6211165..6211953 (-) 789 WP_046911342.1 transcriptional repressor LexA Regulator
  OG309_RS28045 (OG309_28045) nrdR 6212455..6212964 (+) 510 WP_329424884.1 transcriptional regulator NrdR -
  OG309_RS28050 (OG309_28050) - 6213140..6216031 (+) 2892 WP_329424886.1 vitamin B12-dependent ribonucleotide reductase -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 28338.09 Da        Isoelectric Point: 6.9854

>NTDB_id=660863 OG309_RS28040 WP_046911342.1 6211165..6211953(-) (dinR/lexA) [Streptomyces sp. NBC_01268]
MTTTADSATITAQDRSQGRLEPVHAMNDAAMNGEEPGRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPS
MREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILAEES
VEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAA
YQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 789 bp        

>NTDB_id=660863 OG309_RS28040 WP_046911342.1 6211165..6211953(-) (dinR/lexA) [Streptomyces sp. NBC_01268]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
TGACGCAGCCATGAACGGGGAGGAGCCCGGCCGACCCGCGCGCTCGCTCCCCGGGCGACCTCCAGGCATCCGGGCCGACA
GCTCCGGCCTCACCGACCGGCAGCGCCGGGTCATCGAGGTCATCCGCGACTCGGTCCAGCGCCGCGGGTACCCGCCGTCG
ATGCGTGAGATCGGGCAGGCCGTGGGCCTCTCCAGCACCTCCTCCGTGGCGCACCAGCTGATGGCCCTGGAGCGCAAGGG
CTTCCTGCGCCGCGACCCGCACCGCCCCCGTGCGTACGAGGTGCGCGGCTCGGACCAGCCCAGCACGCAGCCGACGGACA
CCACCGGCAAGCCCGCCGCCTCCTACGTCCCCCTGGTCGGGCGTATCGCGGCGGGTGGCCCCATCCTGGCCGAGGAGTCC
GTCGAGGACGTCTTCCCGCTCCCCCGACAGCTGGTCGGCGACGGCGAGCTCTTCGTCCTCAAGGTCGTCGGTGACTCCAT
GATCGAGGCCGCCATCTGCGACGGGGACTGGGTCACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTGGCCG
CCATGCTCGACGGCGAGGCCACGGTCAAGCGCTTCAAGCGCGAGGACGGGCACGTCTGGCTGCTCCCGCACAACGCGGCG
TACCAGCCGATCCCCGGCGACGAGGCCACCATCCTCGGCAAGGTCGTCGCCGTGCTGCGACGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(144-256)

LexA DNA binding domain (LexA_DNA_bind)

(55-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2P2GEZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.916

0.374