Detailed information NTG0066084

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R00_RS22260
• Genome accession: NZ_AP022105
• Coordinates: 4645258..4646283 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WP5-S17-ESBL-10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4640258..4651283

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R00_RS22240 (WP5S17E10_43340)	metJ	4641319..4641636 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7R00_RS22245 (WP5S17E10_43350)	yiiX	4641820..4642428 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
H7R00_RS22250 (WP5S17E10_43360)	rpmE	4642489..4642701 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R00_RS22255 (WP5S17E10_43370)	priA	4642904..4645102 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
H7R00_RS22260 (WP5S17E10_43380)	cytR	4645258..4646283 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
H7R00_RS22265 (WP5S17E10_43390)	ftsN	4646375..4647334 (+)	960	WP_000068828.1	cell division protein FtsN	-
H7R00_RS22270 (WP5S17E10_43400)	hslV	4647427..4647957 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R00_RS22275 (WP5S17E10_43410)	hslU	4647967..4649298 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
H7R00_RS22280 (WP5S17E10_43420)	menA	4649365..4650291 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R00_RS22285 (WP5S17E10_43430)	rraA	4650384..4650869 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R00_RS22290 (WP5S17E10_43440)	zapB	4650954..4651199 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=66084 H7R00_RS22260 WP_000644904.1 4645258..4646283(+) (cytR) [Escherichia coli strain WP5-S17-ESBL-10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=66084 H7R00_RS22260 WP_000644904.1 4645258..4646283(+) (cytR) [Escherichia coli strain WP5-S17-ESBL-10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628