Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG309_RS16170 Genome accession   NZ_CP108454
Coordinates   3669797..3670855 (+) Length   352 a.a.
NCBI ID   WP_329428358.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01268     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3664797..3675855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG309_RS16155 (OG309_16155) - 3665504..3666307 (+) 804 WP_329428356.1 hypothetical protein -
  OG309_RS16160 (OG309_16160) - 3666326..3668020 (-) 1695 WP_329421569.1 hypothetical protein -
  OG309_RS16165 (OG309_16165) radA/sms 3668232..3669641 (+) 1410 WP_329421571.1 DNA repair protein RadA Machinery gene
  OG309_RS16170 (OG309_16170) disA 3669797..3670855 (+) 1059 WP_329428358.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG309_RS16175 (OG309_16175) - 3670926..3671762 (-) 837 WP_329421572.1 hypothetical protein -
  OG309_RS16180 (OG309_16180) - 3671969..3672631 (+) 663 WP_329421574.1 phosphatase PAP2 family protein -
  OG309_RS16185 (OG309_16185) - 3672665..3673591 (+) 927 WP_329421577.1 A/G-specific adenine glycosylase -
  OG309_RS16190 (OG309_16190) - 3673819..3674400 (+) 582 WP_329421579.1 SigE family RNA polymerase sigma factor -
  OG309_RS16195 (OG309_16195) - 3674433..3675062 (+) 630 WP_329421580.1 hypothetical protein -
  OG309_RS16200 (OG309_16200) cseB 3675081..3675785 (+) 705 WP_329421582.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 352 a.a.        Molecular weight: 38256.99 Da        Isoelectric Point: 5.0965

>NTDB_id=660832 OG309_RS16170 WP_329428358.1 3669797..3670855(+) (disA) [Streptomyces sp. NBC_01268]
MRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVIDVDFTATRLRELCKLDGAIVLDKDISKILRAG
VQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVNGERRVLEESAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIAGVEPERELVVRDYVPEPTAKRS
RTVAEALTELDALTHAELLELPIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGAIIERLVEHFGGLQKLLAASVDD
LQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=660832 OG309_RS16170 WP_329428358.1 3669797..3670855(+) (disA) [Streptomyces sp. NBC_01268]
ATGCGTGCGTCGCTCAGCGCCGTCGCCCCCGGCACCGCGCTCCGCGACGGTCTCGAACGCATCCTGCGCGGCAACACCGG
CGGCCTGATCGTCCTCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTCATCGACGTCGACTTCACCG
CGACGCGGCTGCGCGAGCTGTGCAAGCTGGACGGGGCGATCGTCCTCGACAAGGACATCTCCAAGATCCTGCGGGCCGGC
GTGCAGCTGGTGCCCGACGCGTCCATCCACACCGAGGAGACCGGCACCCGCCACCGCACCGCGGACCGGGTCTCCAAGCA
GTGCGGCTTCCCGGTGGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTCAACGGCGAGCGGCGCGTCCTGG
AGGAGTCCGCGGCGATCCTGTCCCGCGCGAACCAGGCGCTCGCCACCCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTG
GCCGGCACGCTCTCCGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTCACCGCCGTCGCCCAGCGCCTGGAGAT
GGTCCGCCGGATCGCCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTCG
ACGAGCTGATCGCGGGCGTCGAGCCGGAGCGCGAGCTGGTCGTCCGGGACTACGTGCCCGAGCCCACCGCCAAGCGTTCG
CGCACGGTCGCCGAGGCGCTCACCGAGCTGGACGCGCTGACCCACGCCGAGCTCCTCGAACTGCCCATAGTGGCGCGGGC
CCTCGGCTACACCGGCTCCCCCGAGACGCTGGACTCGGCGGTCTCGCCGCGCGGCTACCGGCTGCTCGCCAAGGTGCCCC
GGCTGCCGGGCGCGATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCGAGCGTGGACGAC
CTCCAGACCGTGGACGGCGTCGGCGAGGCCCGGGCCCGCAGCGTCCGCGAGGGGCTGTCCCGGCTCGCGGAGTCCTCGAT
CCTGGAGCGGTACGTCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

47.399

98.295

0.466