Detailed information NTG0660735

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: MLD62_RS26430
• Genome accession: NZ_CP092833
• Coordinates: 5135841..5137190 (-)
• Length: 449 a.a.
• NCBI ID: WP_241139165.1
• Uniprot ID: -
• Organism: Bacillus mycoides strain LX30
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5130841..5142190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MLD62_RS26405	-	5132382..5133320 (-)	939	WP_214933323.1	YafY family protein	-
MLD62_RS26410	-	5133403..5133846 (+)	444	WP_002139133.1	VOC family protein	-
MLD62_RS26415	raiA	5133950..5134492 (-)	543	WP_002034758.1	ribosome-associated translation inhibitor RaiA	-
MLD62_RS26420	cspC	5134813..5135010 (-)	198	WP_001990088.1	cold shock protein CspC	-
MLD62_RS26425	-	5135137..5135841 (-)	705	WP_241138721.1	ComF family protein	-
MLD62_RS26430	comFA	5135841..5137190 (-)	1350	WP_241139165.1	ATP-dependent helicase ComFA	Machinery gene
MLD62_RS26435	-	5137321..5138628 (-)	1308	WP_241138722.1	C40 family peptidase	-
MLD62_RS26440	-	5138894..5139208 (-)	315	WP_002089608.1	helix-turn-helix domain-containing protein	-
MLD62_RS26445	-	5139370..5140212 (-)	843	WP_002016143.1	DegV family protein	-
MLD62_RS26450	-	5140593..5141228 (+)	636	WP_241138723.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50856.25 Da
• Isoelectric Point: 9.4431

>NTDB_id=660735 MLD62_RS26430 WP_241139165.1 5135841..5137190(-) (comFA) [Bacillus mycoides strain LX30]
MLAGRQLLLEELSSDLQDKLDHLKKNRDVVCVQGVIKKSSKYMCQRCGNIEQRIFASLLCKRCNEVCTYCRKCITMGRVS
ECTVLVRGIAEISGESYLNPLQWEGILSDGQELAAQSVVDAVKQKESFFIWAVCGAGKTEMLFRGIAEALQKGERVCIAT
PRTDVVLELAPRLQEVFPNINVAALYGGSLDREKDAALIVATTHQLLRYYRAFHVMIVDEIDAFPYHADKMLQYAVNEAM
KEKAARIYLTATPDEKWKRKLRSGKQKGVIISGRYHRHPLPVPIFRWCGNWKKGVIRKKIPRALLQWLNLYLSKRYPIFL
FVPHVRYVEEISQLLKSLNNQIDGVHAEDPARKEKVAAFRKGEIPLLVTTTILERGVTIKNLQVAVLGAEEEIFSESALV
QIAGRAGRSSDEPHGDVIYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=660735 MLD62_RS26430 WP_241139165.1 5135841..5137190(-) (comFA) [Bacillus mycoides strain LX30]
ATGTTAGCTGGTAGACAGTTACTGTTAGAAGAACTCTCTTCAGATTTGCAGGATAAATTGGATCATTTGAAAAAGAATCG
AGACGTCGTTTGTGTACAAGGGGTAATTAAGAAGTCTTCAAAATATATGTGTCAGCGCTGCGGAAATATAGAGCAGCGAA
TATTTGCATCATTGCTATGTAAAAGGTGCAATGAAGTATGTACGTATTGCCGGAAATGTATAACGATGGGCAGGGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAATAAGCGGAGAAAGTTATTTGAATCCGTTACAGTGGGAAGGCATTTT
GTCTGACGGTCAGGAGTTAGCTGCGCAAAGTGTCGTTGACGCTGTTAAGCAGAAAGAATCATTTTTTATTTGGGCGGTGT
GCGGGGCTGGAAAAACAGAAATGTTGTTTCGCGGAATTGCAGAGGCACTACAAAAGGGGGAAAGAGTTTGTATTGCAACG
CCGAGAACGGACGTTGTACTTGAATTAGCACCAAGATTACAAGAAGTGTTTCCAAATATAAATGTAGCTGCTTTATACGG
AGGGAGTTTAGACCGAGAAAAAGATGCGGCGTTAATCGTTGCAACTACACATCAATTGTTACGTTATTATAGGGCGTTCC
ATGTCATGATTGTAGATGAGATAGATGCTTTTCCGTATCATGCAGATAAGATGTTGCAGTATGCAGTAAACGAAGCGATG
AAAGAGAAGGCAGCACGTATTTATTTAACTGCAACTCCAGATGAAAAGTGGAAGCGTAAGTTGCGAAGTGGTAAGCAAAA
AGGGGTTATTATTTCAGGGCGATACCATCGTCATCCATTGCCAGTTCCGATATTTCGGTGGTGCGGAAATTGGAAAAAGG
GTGTTATACGTAAAAAAATTCCTCGTGCTTTATTACAATGGTTAAATCTGTACTTATCGAAACGATACCCCATTTTTCTA
TTTGTTCCTCATGTGCGATATGTAGAAGAAATTAGCCAGTTATTAAAATCATTAAACAATCAAATTGACGGTGTGCATGC
AGAAGATCCGGCGAGAAAAGAGAAGGTAGCAGCTTTCAGAAAAGGAGAAATCCCTTTATTAGTTACAACGACGATTTTGG
AACGAGGAGTAACTATTAAAAATTTACAAGTTGCAGTTTTAGGAGCTGAGGAAGAAATATTTTCAGAAAGTGCTCTCGTT
CAAATTGCAGGGCGTGCTGGCAGAAGCTCTGATGAACCGCATGGAGATGTCATCTATTTTCATTATGGAAAGACAGAGGC
GATGGTGCGTGCGAAAAAACATATTCAAAGTATGAATAAGAATGCTAAAGAACAAGGACTGATAGATTGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-409)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.226	98.441	0.494
comFA	Latilactobacillus sakei subsp. sakei 23K	40.695	89.755	0.365