Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   MLD62_RS06155 Genome accession   NZ_CP092833
Coordinates   1213157..1213840 (+) Length   227 a.a.
NCBI ID   WP_002011351.1    Uniprot ID   R8DDT2
Organism   Bacillus mycoides strain LX30     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1208157..1218840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MLD62_RS06135 - 1209139..1210785 (+) 1647 WP_085309741.1 peptide ABC transporter substrate-binding protein -
  MLD62_RS06140 - 1210816..1211019 (-) 204 WP_000559981.1 hypothetical protein -
  MLD62_RS06145 spx 1211600..1211995 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  MLD62_RS06150 - 1212046..1212720 (-) 675 WP_002011349.1 TerC family protein -
  MLD62_RS06155 mecA 1213157..1213840 (+) 684 WP_002011351.1 adaptor protein MecA Regulator
  MLD62_RS06160 - 1213913..1215457 (+) 1545 WP_002064255.1 cardiolipin synthase -
  MLD62_RS06165 - 1215549..1216784 (+) 1236 WP_044437788.1 competence protein CoiA family protein -
  MLD62_RS06170 pepF 1216835..1218661 (+) 1827 WP_085309743.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27029.17 Da        Isoelectric Point: 4.0116

>NTDB_id=660707 MLD62_RS06155 WP_002011351.1 1213157..1213840(+) (mecA) [Bacillus mycoides strain LX30]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=660707 MLD62_RS06155 WP_002011351.1 1213157..1213840(+) (mecA) [Bacillus mycoides strain LX30]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGATATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB R8DDT2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546