Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG564_RS21570 Genome accession   NZ_CP108438
Coordinates   4801395..4802519 (+) Length   374 a.a.
NCBI ID   WP_266673013.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01280     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4796395..4807519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG564_RS21555 (OG564_21550) - 4796941..4797870 (+) 930 WP_266673019.1 hypothetical protein -
  OG564_RS21560 (OG564_21555) - 4797903..4799618 (-) 1716 WP_266673017.1 hypothetical protein -
  OG564_RS21565 (OG564_21560) radA/sms 4799873..4801282 (+) 1410 WP_266673015.1 DNA repair protein RadA Machinery gene
  OG564_RS21570 (OG564_21565) disA 4801395..4802519 (+) 1125 WP_266673013.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG564_RS21575 (OG564_21570) - 4803283..4804077 (-) 795 WP_329434321.1 hypothetical protein -
  OG564_RS21580 (OG564_21575) - 4804263..4804904 (+) 642 WP_266673011.1 phosphatase PAP2 family protein -
  OG564_RS21585 (OG564_21580) - 4804905..4805552 (-) 648 WP_329434322.1 response regulator transcription factor -
  OG564_RS21590 (OG564_21585) - 4805549..4807150 (-) 1602 WP_329434323.1 histidine kinase -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40341.21 Da        Isoelectric Point: 4.9304

>NTDB_id=660583 OG564_RS21570 WP_266673013.1 4801395..4802519(+) (disA) [Streptomyces sp. NBC_01280]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELDALTHAELLELPTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=660583 OG564_RS21570 WP_266673013.1 4801395..4802519(+) (disA) [Streptomyces sp. NBC_01280]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGCAAGTCCGGCGGGAGCTCCGGTGCCGATGGGCTGATGCGCGCCTCACT
GAGCGCGGTCGCGCCCGGTACGGCGCTGCGTGACGGCCTCGAGCGAATCCTCCGCGGCAACACCGGCGGACTCATCGTTC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGTTTCATCCTGGACGTCGAGTTCACCGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGTTGGTGCC
CGACCCCACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCAGCTTCCCCG
TGGTCTCGGTGTCGCAGTCGATGCGGCTCATCGCCCTCTACGTGGACGGGCAGCGGCGCGTCCTCGAGGACTCGGCCGCG
ATTCTCTCGCGGGCGAATCAGGCGCTGGCCACTCTTGAGCGGTACAAGCTCCGCTTGGACGAGGTGGCCGGGACACTCTC
CGCGCTCGAGATCGAGGATCTCGTGACCGTGCGGGATGTGACCGCGGTCGCGCAGCGGCTGGAAATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACGGATGGGCGACTGCTCGCCCTTCAGCTCGACGAGTTGATCGCC
GGGGTGGAGCCCGAGCGGGAGCTCGTCGTTCGGGACTACGTGCCCGAACCCACGGCCAAGCGGTCCCGGACCGTCGACGA
GGCCCTGTTCGAACTCGACGCGCTGACGCATGCCGAGCTTCTCGAACTGCCCACTGTGGCACGCGCGTTGGGGTACACCG
GGTCTCCGGAGACCCTGGACTCGGCCGTTTCGCCTCGTGGGTTCCGGCTGTTGGCGAAGGTGCCTCGGCTGCCCGGGGCC
ATCATTGAGCGGCTTGTCGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCCAGCGTCGACGATCTGCAGACCGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGGAGCGTGCGGGAAGGACTCTCGCGGTTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433