Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MKK04_RS24290 Genome accession   NZ_CP092827
Coordinates   5271572..5271973 (-) Length   133 a.a.
NCBI ID   WP_003257770.1    Uniprot ID   A0AAI8FHY9
Organism   Pseudomonas sp. LS.1a     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5266572..5276973
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKK04_RS24275 (MKK04_24275) - 5268542..5270566 (-) 2025 WP_233687396.1 methyl-accepting chemotaxis protein -
  MKK04_RS24280 (MKK04_24280) - 5270608..5271162 (-) 555 WP_003257767.1 chemotaxis protein CheW -
  MKK04_RS24285 (MKK04_24285) pilH 5271159..5271524 (-) 366 WP_025340906.1 twitching motility response regulator PilH -
  MKK04_RS24290 (MKK04_24290) pilG 5271572..5271973 (-) 402 WP_003257770.1 response regulator Regulator
  MKK04_RS24295 (MKK04_24295) gshB 5272211..5273164 (+) 954 WP_207828505.1 glutathione synthase -
  MKK04_RS24300 (MKK04_24300) - 5273256..5274161 (+) 906 WP_207828502.1 energy transducer TonB -
  MKK04_RS24305 (MKK04_24305) - 5274333..5274902 (+) 570 WP_207828494.1 YqgE/AlgH family protein -
  MKK04_RS24310 (MKK04_24310) ruvX 5274902..5275339 (+) 438 WP_013974530.1 Holliday junction resolvase RuvX -
  MKK04_RS24315 (MKK04_24315) pyrR 5275389..5275907 (+) 519 WP_063912001.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  MKK04_RS24320 (MKK04_24320) - 5275920..5276924 (+) 1005 WP_241106048.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14576.82 Da        Isoelectric Point: 6.4772

>NTDB_id=660533 MKK04_RS24290 WP_003257770.1 5271572..5271973(-) (pilG) [Pseudomonas sp. LS.1a]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAAQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=660533 MKK04_RS24290 WP_003257770.1 5271572..5271973(-) (pilG) [Pseudomonas sp. LS.1a]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCGCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATTTTCG
TCGATGTGCTGATGCCGCGCCTGGACGGTTACCAGACCTGCGCGGTGATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTCATTCTGCTGTCGTCACGCGACGGCCTGTTCGACAAGGCCCGTGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAGCTGCTCGATGCGATCCGCGCCCATGTGCCCGGTTTTGCCGCAGCCCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632