Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MK848_RS18005 Genome accession   NZ_CP092824
Coordinates   3524171..3524965 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain S1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3519171..3529965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK848_RS17975 (MK848_17940) sxzA 3520010..3521041 (+) 1032 WP_029317459.1 iron chelate uptake ABC transporter family permease subunit -
  MK848_RS17980 (MK848_17945) yfhB 3521156..3522037 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  MK848_RS17985 (MK848_17950) yfhC 3522125..3522709 (+) 585 WP_003243940.1 nitroreductase -
  MK848_RS17990 (MK848_17955) yfhD 3522748..3522939 (-) 192 WP_003233561.1 YfhD family protein -
  MK848_RS17995 (MK848_17960) yfhE 3523006..3523116 (-) 111 WP_003223230.1 YfhE family protein -
  MK848_RS18000 (MK848_17965) yfhF 3523171..3524082 (-) 912 WP_029317458.1 TIGR01777 family oxidoreductase -
  MK848_RS18005 (MK848_17970) recX 3524171..3524965 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  MK848_RS18010 (MK848_17975) yfhH 3524967..3525281 (+) 315 WP_003244592.1 YfhH family protein -
  MK848_RS18015 (MK848_17980) yfhI 3525424..3526617 (+) 1194 WP_029317457.1 MFS transporter -
  MK848_RS18020 (MK848_17985) sspK 3526649..3526801 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  MK848_RS18025 (MK848_17990) yfhJ 3526926..3527195 (+) 270 WP_003243789.1 YfhJ family protein -
  MK848_RS18030 (MK848_17995) yfhK 3527340..3527858 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  MK848_RS18035 (MK848_18000) spdL 3527943..3528260 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  MK848_RS18040 (MK848_18005) ephM 3528262..3529122 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=660459 MK848_RS18005 WP_003243354.1 3524171..3524965(+) (recX) [Bacillus subtilis strain S1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=660459 MK848_RS18005 WP_003243354.1 3524171..3524965(+) (recX) [Bacillus subtilis strain S1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTTATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1