Detailed information NTG0066044

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BBS798_RS04575
• Genome accession: NZ_AP014582
• Coordinates: 998909..1000108 (+)
• Length: 399 a.a.
• NCBI ID: WP_033455490.1
• Uniprot ID: -
• Organism: Bordetella bronchiseptica strain S798
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 993909..1005108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBS798_RS04550 (BBS798_0910)	-	995769..996155 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
BBS798_RS04555 (BBS798_0911)	-	996163..997380 (-)	1218	WP_003808568.1	benzoate/H(+) symporter BenE family transporter	-
BBS798_RS04560 (BBS798_0912)	-	997377..997628 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
BBS798_RS04565 (BBS798_0913)	coaD	997683..998192 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
BBS798_RS04570 (BBS798_0914)	rsmD	998213..998833 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BBS798_RS04575 (BBS798_0915)	pilA	998909..1000108 (+)	1200	WP_033455490.1	signal recognition particle-docking protein FtsY	Machinery gene
BBS798_RS04580 (BBS798_0916)	-	1000155..1001753 (-)	1599	WP_003808580.1	CYTH and CHAD domain-containing protein	-
BBS798_RS04585 (BBS798_0917)	phnE	1001992..1002813 (-)	822	WP_003808584.1	phosphonate ABC transporter, permease protein PhnE	-
BBS798_RS04590 (BBS798_0918)	phnE	1002810..1003700 (-)	891	WP_003808587.1	phosphonate ABC transporter, permease protein PhnE	-
BBS798_RS04595 (BBS798_0919)	phnC	1003697..1004467 (-)	771	WP_003808589.1	phosphonate ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 399 a.a.
• Molecular weight: 41665.64 Da
• Isoelectric Point: 5.5094

>NTDB_id=66044 BBS798_RS04575 WP_033455490.1 998909..1000108(+) (pilA) [Bordetella bronchiseptica strain S798]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPAPMPAPQPEPQPEPQPQQPPEPAPPAMASPPVAEPQPS
VAEPQPPVAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKE
RIDDPAQVKTALRQLLADHLRPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQ
LVEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVD
GNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1200 bp

>NTDB_id=66044 BBS798_RS04575 WP_033455490.1 998909..1000108(+) (pilA) [Bordetella bronchiseptica strain S798]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAACCGGCCCCGATGCCGGCCCCCCAGCCCGAGCCGCAGC
CCGAGCCGCAGCCGCAACAACCGCCCGAGCCGGCGCCGCCGGCCATGGCGTCGCCGCCTGTCGCCGAGCCGCAGCCATCT
GTCGCCGAGCCGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGG
CCTGTCGCGCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGT
CGGCGCTGATCATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAG
CGCATCGACGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTT
CGACCTGGGGCGGGCCCAGCCCCTGGTGGTCATGATTGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGC
TGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAA
TTGGTCGAATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTC
GGTCAATGCCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGA
TGGAAGAATTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGAT
GGCAACACCGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAA
GCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATT
GGATCGGCGTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (115-174)

• SRP54-type protein, GTPase domain (SRP54) (195-397)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.7	100	0.516