Detailed information NTG0660339

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG534_RS23505
• Genome accession: NZ_CP108423
• Coordinates: 5180429..5181481 (+)
• Length: 350 a.a.
• NCBI ID: WP_326590450.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01294
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5175429..5186481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG534_RS23485 (OG534_23520)	-	5175807..5177174 (-)	1368	WP_326593778.1	GH1 family beta-glucosidase	-
OG534_RS23490 (OG534_23525)	-	5177186..5178010 (-)	825	WP_326590447.1	carbohydrate ABC transporter permease	-
OG534_RS23495 (OG534_23530)	-	5178007..5178912 (-)	906	WP_326593779.1	sugar ABC transporter permease	-
OG534_RS23500 (OG534_23535)	-	5179010..5180287 (-)	1278	WP_326590449.1	extracellular solute-binding protein	-
OG534_RS23505 (OG534_23540)	cytR	5180429..5181481 (+)	1053	WP_326590450.1	LacI family DNA-binding transcriptional regulator	Regulator
OG534_RS23515 (OG534_23550)	orn	5181730..5182332 (-)	603	WP_326590451.1	oligoribonuclease	-
OG534_RS23520 (OG534_23555)	-	5182435..5183607 (-)	1173	WP_326590453.1	helix-turn-helix domain-containing protein	-
OG534_RS23525 (OG534_23560)	-	5183984..5184304 (-)	321	WP_326593780.1	hypothetical protein	-
OG534_RS23530 (OG534_23565)	-	5184763..5185296 (+)	534	WP_319722977.1	universal stress protein	-
OG534_RS23535 (OG534_23570)	-	5185331..5185483 (-)	153	Protein_4639	transposase	-
OG534_RS23540 (OG534_23575)	-	5185607..5186173 (+)	567	WP_326590456.1	GPR1/FUN34/YaaH family transporter	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 36925.93 Da
• Isoelectric Point: 6.6179

>NTDB_id=660339 OG534_RS23505 WP_326590450.1 5180429..5181481(+) (cytR) [Streptomyces sp. NBC_01294]
MKGHGGTRGRPTLEEVAARAGVGRGTVSRVINGSSKVSEHAKAAVAAAVAELGYVPNRAARALAANRTDAIALVIPEPEA
RFFAEPYFSEVVRGVGAALAETDVQLVLTLAGGDRERRRLSQYLSGHRVDGVLLVSVHAGDPLPELLAELGIPTVISGRR
SAAETLPCVDSDNLAGAAEAVRHLLERGRRTIATITGPLDVYGAQCRLDGYRQALAAAGRLADEQLIAVGDFTEDGGRRA
MRELLERRPALDAVFAASDVMAAGAVRELRAAGRRIPQDVALVGFDDSVVARHMDPPLTSVRQPIEEMGRTMAQVLLDRI
SGHQGSAGEPGEPGEVSVVLPNRLVVRESS

Nucleotide

• Length: 1053 bp

>NTDB_id=660339 OG534_RS23505 WP_326590450.1 5180429..5181481(+) (cytR) [Streptomyces sp. NBC_01294]
ATGAAAGGGCACGGGGGTACGAGGGGGCGTCCGACCCTGGAAGAGGTCGCGGCGCGCGCCGGAGTCGGGCGCGGCACGGT
CTCCCGGGTGATCAACGGATCTTCCAAGGTCAGCGAGCACGCGAAGGCCGCCGTCGCGGCGGCCGTGGCCGAGCTGGGGT
ACGTACCGAACCGGGCCGCGCGCGCCCTCGCGGCCAACCGCACCGACGCCATCGCCCTCGTGATTCCGGAACCCGAGGCC
CGGTTCTTCGCCGAGCCCTACTTCTCCGAAGTGGTCCGCGGGGTCGGCGCCGCCCTCGCCGAGACCGACGTACAGCTCGT
CCTCACCCTGGCGGGCGGCGACCGCGAGCGCCGGCGCCTCTCCCAGTACCTGTCCGGGCACCGCGTCGACGGGGTGCTCC
TCGTCTCCGTCCACGCCGGCGACCCGCTGCCGGAGCTGCTGGCCGAGCTCGGCATCCCGACGGTGATCAGCGGCCGCCGC
TCCGCCGCCGAGACGCTGCCCTGCGTGGACTCCGACAACCTGGCGGGCGCCGCCGAGGCCGTGCGCCACCTCCTCGAACG
GGGCCGCCGCACGATCGCCACGATCACCGGCCCGCTCGACGTGTACGGGGCCCAGTGCCGCCTCGACGGCTACCGGCAGG
CCCTGGCCGCCGCCGGACGTCTCGCCGACGAGCAGCTGATCGCGGTCGGCGACTTCACCGAGGACGGCGGCCGGCGGGCC
ATGCGCGAGCTGCTGGAGCGCCGCCCCGCGCTCGACGCGGTCTTCGCCGCCTCGGACGTCATGGCGGCGGGCGCCGTGCG
GGAGCTGCGGGCGGCCGGGCGCCGGATCCCGCAGGACGTGGCGCTGGTCGGCTTCGACGACTCGGTGGTGGCCCGGCACA
TGGACCCGCCGCTGACCAGCGTCCGGCAGCCGATCGAGGAGATGGGCCGGACCATGGCGCAGGTGCTGCTGGACCGCATC
TCCGGACATCAGGGGAGTGCGGGGGAGCCGGGGGAGCCGGGCGAGGTGAGCGTCGTCCTGCCGAACCGCCTGGTGGTCCG
TGAATCCTCGTAG

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-350)

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	37.681	98.571	0.371
cytR	Vibrio parahaemolyticus RIMD 2210633	36.705	98.857	0.363