Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG730_RS18530 Genome accession   NZ_CP108414
Coordinates   4111121..4112245 (+) Length   374 a.a.
NCBI ID   WP_243339766.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01298     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4106121..4117245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG730_RS18515 (OG730_18490) - 4106566..4107423 (+) 858 WP_327305266.1 hypothetical protein -
  OG730_RS18520 (OG730_18495) - 4107443..4109269 (-) 1827 WP_327305267.1 hypothetical protein -
  OG730_RS18525 (OG730_18500) radA/sms 4109489..4110916 (+) 1428 WP_327305268.1 DNA repair protein RadA Machinery gene
  OG730_RS18530 (OG730_18505) disA 4111121..4112245 (+) 1125 WP_243339766.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG730_RS18535 (OG730_18510) - 4112337..4113173 (-) 837 WP_327305269.1 hypothetical protein -
  OG730_RS18540 (OG730_18515) - 4113363..4113971 (+) 609 WP_327305270.1 phosphatase PAP2 family protein -
  OG730_RS18545 (OG730_18520) - 4114047..4114967 (+) 921 WP_327305271.1 A/G-specific adenine glycosylase -
  OG730_RS18550 (OG730_18525) - 4115157..4115717 (+) 561 WP_327305272.1 SigE family RNA polymerase sigma factor -
  OG730_RS18555 (OG730_18530) - 4115756..4116412 (+) 657 WP_327309324.1 hypothetical protein -
  OG730_RS18560 (OG730_18535) cseB 4116445..4117146 (+) 702 WP_327305273.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40360.34 Da        Isoelectric Point: 5.1189

>NTDB_id=660235 OG730_RS18530 WP_243339766.1 4111121..4112245(+) (disA) [Streptomyces sp. NBC_01298]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=660235 OG730_RS18530 WP_243339766.1 4111121..4112245(+) (disA) [Streptomyces sp. NBC_01298]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCCCTGCGTGACGGGCTCGAACGGATCGTTCGCGGCAATACCGGAGGGCTCATCGTCC
TCGGGATGGACAAGTCGGTCGAGGCCATGTGCACGGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGCTGGTGCC
CGACGCCTCGATCCACACGGAGGAGACGGGCACCCGGCACCGGACCGCGGACCGGGTCTCGAAGCAGTGCGGTTTCCCGG
TGGTGTCGGTCTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGGCGCGTGCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCACTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCCGGGACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCACGGCGGTGGCGCAGCGCCTGGAGATGGTCCGGCGCATCG
CGACGGAGATCGCGGAGTACGTGGTGGAGCTCGGCACGGACGGCCGGCTGCTCTCCCTCCAGCTCGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGGGAGCTCGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCACTGCCGGCGCTGGACGCGCTGACGCATCCGGAGCTGCTGGAGCTGGCCATCGTGGCGAAGGCCCTCGGGTACACGG
GCTCGCCGGAGACCCTGGACTCGGCGGTGTCCCCGCGCGGGTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCCTCGGTGGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCGCGTGCGCGCAGCGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCCTCCATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444