Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   SMUNUM_RS10375 Genome accession   NZ_AP014571
Coordinates   2093809..2094582 (+) Length   257 a.a.
NCBI ID   WP_019314984.1    Uniprot ID   -
Organism   Streptococcus mutans LP13     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2088809..2099582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNUM_RS10360 (SMNUM_1963) - 2090448..2091110 (-) 663 WP_002262652.1 YoaK family protein -
  SMUNUM_RS10365 (SMNUM_1964) rlmH 2091453..2091932 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SMUNUM_RS10370 (SMNUM_1965) htrA 2092138..2093346 (+) 1209 WP_002262650.1 trypsin-like peptidase domain-containing protein Regulator
  SMUNUM_RS10375 (SMNUM_1966) spo0J 2093809..2094582 (+) 774 WP_019314984.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 29637.38 Da        Isoelectric Point: 10.1578

>NTDB_id=66021 SMUNUM_RS10375 WP_019314984.1 2093809..2094582(+) (spo0J) [Streptococcus mutans LP13]
MMTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVII
KKISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQ
GHARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLK
ISFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 774 bp        

>NTDB_id=66021 SMUNUM_RS10375 WP_019314984.1 2093809..2094582(+) (spo0J) [Streptococcus mutans LP13]
ATGATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAAC
TAAAGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTT
TTGGCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATC
AAAAAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGA
AGCCAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGAC
CATATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAA
GGACACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTT
AAGTGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAG
AAAAAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAA
ATTTCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.611

100

0.996


Multiple sequence alignment