Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   MK616_RS07240 Genome accession   NZ_CP092778
Coordinates   1388521..1388985 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus amyloliquefaciens strain WF2020     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1383521..1393985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK616_RS07220 (MK616_07220) - 1384002..1385822 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  MK616_RS07225 (MK616_07225) - 1385803..1387016 (-) 1214 Protein_1366 aminotransferase A -
  MK616_RS07230 (MK616_07230) - 1387217..1387378 (-) 162 WP_007409608.1 hypothetical protein -
  MK616_RS07235 (MK616_07235) cheV 1387567..1388478 (+) 912 WP_014417604.1 chemotaxis protein CheV -
  MK616_RS07240 (MK616_07240) kre 1388521..1388985 (-) 465 WP_003154622.1 YkyB family protein Regulator
  MK616_RS07245 (MK616_07245) - 1389108..1390400 (-) 1293 WP_014417606.1 MFS transporter -
  MK616_RS07250 (MK616_07250) - 1390476..1390970 (-) 495 WP_094296114.1 L,D-transpeptidase family protein -
  MK616_RS07255 (MK616_07255) - 1391045..1391908 (-) 864 WP_100261749.1 metallophosphoesterase -
  MK616_RS07260 (MK616_07260) fadH 1392052..1392816 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  MK616_RS07265 (MK616_07265) - 1392930..1393479 (+) 550 Protein_1374 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=660192 MK616_RS07240 WP_003154622.1 1388521..1388985(-) (kre) [Bacillus amyloliquefaciens strain WF2020]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=660192 MK616_RS07240 WP_003154622.1 1388521..1388985(-) (kre) [Bacillus amyloliquefaciens strain WF2020]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCTGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929