Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   MK616_RS05740 Genome accession   NZ_CP092778
Coordinates   1118732..1118923 (+) Length   63 a.a.
NCBI ID   WP_014417408.1    Uniprot ID   I2C3H7
Organism   Bacillus amyloliquefaciens strain WF2020     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1113732..1123923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MK616_RS05710 (MK616_05710) argF 1114583..1115554 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  MK616_RS05715 (MK616_05715) - 1115630..1115809 (+) 180 WP_003155070.1 YjzC family protein -
  MK616_RS05720 (MK616_05720) - 1115846..1116031 (-) 186 WP_007409129.1 YjzD family protein -
  MK616_RS05725 (MK616_05725) - 1116292..1117026 (+) 735 WP_014417405.1 hypothetical protein -
  MK616_RS05730 (MK616_05730) - 1117109..1117675 (+) 567 WP_021494976.1 hypothetical protein -
  MK616_RS05735 (MK616_05735) med 1117766..1118719 (+) 954 WP_072177123.1 BMP family ABC transporter substrate-binding protein Regulator
  MK616_RS05740 (MK616_05740) comZ 1118732..1118923 (+) 192 WP_014417408.1 ComZ family protein Regulator
  MK616_RS05745 (MK616_05745) - 1118952..1119170 (-) 219 WP_007409123.1 hypothetical protein -
  MK616_RS05750 (MK616_05750) - 1119337..1120275 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  MK616_RS05755 (MK616_05755) fabF 1120298..1121536 (+) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  MK616_RS05760 (MK616_05760) - 1121620..1122405 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  MK616_RS05765 (MK616_05765) - 1122579..1123565 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7185.30 Da        Isoelectric Point: 4.2259

>NTDB_id=660185 MK616_RS05740 WP_014417408.1 1118732..1118923(+) (comZ) [Bacillus amyloliquefaciens strain WF2020]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEIIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=660185 MK616_RS05740 WP_014417408.1 1118732..1118923(+) (comZ) [Bacillus amyloliquefaciens strain WF2020]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATAATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3H7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794