Detailed information NTG0660115

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG349_RS33350
• Genome accession: NZ_CP108393
• Coordinates: 7728658..7729956 (-)
• Length: 432 a.a.
• NCBI ID: WP_327238144.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01317
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7723658..7734956

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
-	clpX	7728658..7729956 (-)	1299	-	-	Regulator

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47088.73 Da
• Isoelectric Point: 4.8311

>NTDB_id=660115 OG349_RS33350 WP_327238144.1 7728658..7729956(-) (clpX) [Streptomyces sp. NBC_01317]
MAPIGDSGDLLKCTFCGKNQKQVRKLIAGPSPLCICDECVGLCNELIEEERDQVASTGPWESPKPREIHAFLEEYVIGQE
GAKKALAVAVYNHYKRIRPRAGAEARDTAGDEPVELGKSNILLIGPTGCGKTYLVQTLARMLDVPFVIADATALTEAGYV
GEDVETILLKLLQAADFDVEKAETGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQE
FIQIDTGSVLFIVGGAFSGLERIIEQRAAHRGIGFGGSVRTREEREGEDAFADVMPEDLLKFGLIPEFVGRLPVVTTVQP
LDQPALTRILTEPRNALIRQYQKLFALDGVELEFTEGAVAAIAEQALLRRTGARAARAILEEVLLNVMYEVPSRDDVARV
VVSRETVLGNVNPTLVPRERPDGDRGHHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=660115 OG349_RS33350 WP_327238144.1 7728658..7729956(-) (clpX) [Streptomyces sp. NBC_01317]
GTGGCACCCATCGGGGACAGCGGCGACCTGCTGAAATGCACGTTCTGCGGGAAGAACCAGAAGCAGGTCAGAAAGCTGAT
CGCGGGTCCGAGCCCGCTGTGCATCTGCGACGAGTGTGTGGGGCTCTGCAACGAGCTGATCGAGGAGGAGCGCGACCAGG
TCGCCTCCACCGGTCCGTGGGAGTCGCCGAAGCCGCGCGAGATCCACGCCTTCCTGGAGGAGTACGTCATCGGGCAGGAG
GGCGCCAAGAAGGCGCTCGCCGTCGCGGTCTACAACCATTACAAGCGCATCCGGCCGAGGGCCGGCGCGGAGGCCCGGGA
CACGGCCGGGGACGAGCCCGTCGAACTCGGCAAGTCCAACATCCTGCTGATCGGCCCCACGGGCTGCGGCAAGACGTACC
TGGTCCAGACCCTCGCGCGCATGCTCGACGTCCCGTTCGTGATCGCCGACGCGACGGCCCTCACGGAGGCCGGCTATGTC
GGGGAGGACGTCGAGACGATCCTGCTCAAGCTCCTCCAGGCCGCCGACTTCGACGTGGAGAAGGCCGAGACGGGCATCGT
CTACATCGACGAGATCGACAAGATCACCCGCAAGAGCGAGAACCCGTCGATCACCCGTGACGTGTCGGGCGAAGGCGTCC
AGCAGGCCCTGCTGAAGATCCTGGAGGGCACGACCGCCAGCGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAG
TTCATCCAGATCGACACGGGGAGTGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGCGGATCATCGAGCAGCG
CGCCGCCCACCGGGGCATCGGGTTCGGCGGCTCGGTCCGCACCCGGGAGGAGCGCGAGGGGGAGGACGCCTTCGCGGACG
TGATGCCCGAGGATCTGCTGAAGTTCGGCCTGATCCCCGAGTTCGTGGGGCGGTTGCCGGTGGTGACGACCGTACAGCCG
CTGGACCAGCCCGCGTTGACCCGGATCCTGACCGAGCCGCGCAACGCGCTCATCCGGCAGTACCAGAAGCTCTTCGCCCT
GGACGGGGTGGAGTTGGAGTTCACCGAGGGGGCCGTCGCCGCGATCGCCGAGCAGGCGCTCCTGCGCCGTACCGGCGCCA
GGGCCGCCCGCGCGATCCTCGAAGAGGTCCTGCTCAACGTGATGTACGAGGTGCCCAGCCGGGACGACGTGGCCCGGGTG
GTGGTCAGCCGGGAGACCGTCCTCGGCAACGTCAATCCGACGCTGGTACCGCGCGAGAGGCCGGACGGCGACCGCGGACA
CCACGAGAAGTCGGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (118-314)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (321-398)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	58.765	93.75	0.551
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	50.966	95.833	0.488