Detailed information NTG0660098

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG349_RS24510
• Genome accession: NZ_CP108393
• Coordinates: 5637275..5638567 (+)
• Length: 430 a.a.
• NCBI ID: WP_161311458.1
• Uniprot ID: A0A6G9H3E9
• Organism: Streptomyces sp. NBC_01317
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5632275..5643567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
-	clpX	5637275..5638567 (+)	1293	-	-	Regulator

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47111.92 Da
• Isoelectric Point: 4.8295

>NTDB_id=660098 OG349_RS24510 WP_161311458.1 5637275..5638567(+) (clpX) [Streptomyces sp. NBC_01317]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPSLEAIADQAILRGTGARGLRAIMEEVLQSVMYDVPSRKDVARVVIT
EDVVLSHVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=660098 OG349_RS24510 WP_161311458.1 5637275..5638567(+) (clpX) [Streptomyces sp. NBC_01317]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGTCCCGGTGTCTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTGGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCTCGTGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGGGCCGGCCG
CGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CGCTGGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAGCACCCTCACCAGGAATTCATCCAG
ATCGACACCACGAACGTCCTGTTCATCGTGGGCGGCGCGTTCTCGGGCCTGGAGCGGATCATCGAGTCGCGGGCCGGCGC
GAAGGGCATCGGCTTCGGTGCCACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAATTCATCGGCCGCCTGCCGGTCCTGACGTCGGTGCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGTCGCTGGAGGCGATCGCCGACCAGGCGATCCTGCGCGGCACGGGCGCGCGGGGGTTGC
GCGCCATCATGGAAGAGGTCCTCCAGTCGGTGATGTACGACGTGCCGTCCCGCAAGGACGTGGCGCGGGTGGTCATCACG
GAGGACGTGGTCCTCTCGCACGTGAACCCGACGCTGGTCCCGCGGGAGCCGCGCATCGTCAAGAACGACGGCCGCCACGA
GAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

3D structure

• AlphaFold DB: A0A6G9H3E9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.488	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	52.67	95.814	0.505