Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AVAEIV_RS01550 Genome accession   NZ_CP092752
Coordinates   297306..297713 (+) Length   135 a.a.
NCBI ID   WP_012699006.1    Uniprot ID   M9YDI7
Organism   Azotobacter vinelandii strain AEIV     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 292306..302713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AVAEIV_RS01525 (AVAEIV_000303) pyrR 293503..294006 (-) 504 WP_012699001.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AVAEIV_RS01530 (AVAEIV_000304) ruvX 294050..294478 (-) 429 WP_012699002.1 Holliday junction resolvase RuvX -
  AVAEIV_RS01535 (AVAEIV_000305) - 294475..295041 (-) 567 WP_373860935.1 YqgE/AlgH family protein -
  AVAEIV_RS01540 (AVAEIV_000306) - 295135..296028 (-) 894 WP_302227940.1 energy transducer TonB -
  AVAEIV_RS01545 (AVAEIV_000307) gshB 296122..297078 (-) 957 WP_012699005.1 glutathione synthase -
  AVAEIV_RS01550 (AVAEIV_000308) pilG 297306..297713 (+) 408 WP_012699006.1 twitching motility response regulator PilG Regulator
  AVAEIV_RS01555 (AVAEIV_000309) - 298066..298785 (-) 720 WP_302227941.1 16S rRNA (uracil(1498)-N(3))-methyltransferase -
  AVAEIV_RS01560 (AVAEIV_000310) - 298928..299467 (+) 540 WP_302227942.1 DUF3087 domain-containing protein -
  AVAEIV_RS01565 (AVAEIV_000311) - 299540..300946 (-) 1407 WP_012699009.1 adenosylmethionine--8-amino-7-oxononanoate transaminase -
  AVAEIV_RS01570 (AVAEIV_000312) - 301106..302620 (+) 1515 WP_231876177.1 flavin monoamine oxidase family protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14855.27 Da        Isoelectric Point: 7.3231

>NTDB_id=660064 AVAEIV_RS01550 WP_012699006.1 297306..297713(+) (pilG) [Azotobacter vinelandii strain AEIV]
MEHHSDGLKVMVIDDSKMIRRTAETLLKRVGCEVITAVDGFDALAKIADGHPRIIFVDIAMPRLDGYQTCALIKNNSAFK
STPVIMLSSRDGLFDKAKGRIVGSEQYLTKPFGKEELLGAIRAHVPDFVPLEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=660064 AVAEIV_RS01550 WP_012699006.1 297306..297713(+) (pilG) [Azotobacter vinelandii strain AEIV]
ATGGAACATCATTCCGACGGTTTGAAGGTCATGGTGATCGACGACTCAAAGATGATTCGTCGCACTGCGGAAACCCTGCT
GAAGAGGGTGGGGTGCGAGGTCATCACCGCCGTGGACGGCTTCGATGCCCTGGCCAAGATCGCCGACGGTCATCCGCGGA
TCATCTTCGTCGACATCGCGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCCTGATCAAGAACAACAGCGCATTCAAG
TCCACGCCGGTGATCATGCTGTCCTCCAGGGACGGCCTGTTCGACAAGGCCAAGGGACGTATCGTCGGTTCCGAGCAGTA
TCTGACCAAGCCCTTCGGCAAGGAAGAACTGCTGGGCGCGATCAGGGCCCACGTGCCCGATTTCGTCCCGCTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M9YDI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

92.593

0.689