Detailed information    

experimental Experimentally validated

Overview

Name   MMJJ_11080   Type   Unclear
Locus tag   MMJJ_RS05495 Genome accession   NZ_CP026606
Coordinates   1026532..1027320 (-) Length   262 a.a.
NCBI ID   WP_011171665.1    Uniprot ID   Q6LWI8
Organism   Methanococcus maripaludis strain DSM 2067     
Function   require for natural transformation   
Unclear

Function

In-frame deletion mutants of MMJJ_11080 were completely defective for transformation, and in trans expression under the control of the high expression Phmv promoter, rescued the transformation defects.


Genomic Context

Location: 1021532..1032320
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMJJ_RS05490 (MMJJ_11070) hisF 1025682..1026500 (-) 819 WP_104838004.1 imidazole glycerol phosphate synthase subunit HisF -
  MMJJ_RS05495 (MMJJ_11080) MMJJ_11080 1026532..1027320 (-) 789 WP_011171665.1 MinD/ParA family ATP-binding protein Unclear
  MMJJ_RS05500 (MMJJ_11090) MMJJ_11090 1027332..1029125 (-) 1794 WP_104838005.1 hypothetical protein Unclear
  MMJJ_RS05505 (MMJJ_11100) - 1029320..1031974 (+) 2655 WP_104838006.1 hypothetical protein -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 29318.51 Da        Isoelectric Point: 4.2655

>NTDB_id=66 MMJJ_RS05495 WP_011171665.1 1026532..1027320(-) (MMJJ_11080) [Methanococcus maripaludis strain DSM 2067]
MRLGFYNIQGGTGKTTIAANIGYYLSDKTKTVYVDCDIYAGCGALLFGFEDSPHTLNSYLSGASALTDIIHQFDDLSVIV
ADSTPNSFNTEINQKRMLELIRVLNDNYDIVLLDLPPNITEGNLLFSSLNLEEKVVNKMIVVAEDSIPGIANTMKTKELL
YAIDIDCIGVIVNKFKDTVDFDEALDDIIAILPYDKKVENQWMENVPAVQMKSKFSKELSYLAEDLAEVYIKKDLAAVRA
LKVAKELKDMTSKRQDVEEDEF

Nucleotide


Download         Length: 789 bp        

>NTDB_id=66 MMJJ_RS05495 WP_011171665.1 1026532..1027320(-) (MMJJ_11080) [Methanococcus maripaludis strain DSM 2067]
ATGAGATTGGGATTTTACAACATACAAGGCGGAACTGGAAAAACGACCATTGCTGCAAATATTGGGTATTACCTGAGTGA
TAAAACCAAAACTGTTTACGTGGATTGCGATATTTACGCTGGTTGTGGGGCCCTGTTATTTGGATTTGAAGATAGCCCCC
ATACGTTAAATTCTTACCTTTCTGGAGCAAGCGCTTTAACAGATATAATACATCAGTTTGACGATCTTTCTGTGATTGTT
GCAGATTCAACACCCAATTCATTCAATACAGAAATTAATCAAAAAAGAATGCTCGAATTAATCAGGGTTTTAAATGATAA
CTATGATATCGTGTTATTAGACCTTCCTCCAAACATTACTGAAGGAAATCTTTTATTTTCTTCTTTGAATTTAGAAGAAA
AAGTAGTAAATAAGATGATTGTTGTTGCAGAAGACAGTATCCCTGGAATTGCAAATACCATGAAAACAAAAGAGCTTCTT
TACGCAATAGATATCGATTGTATTGGTGTTATTGTAAACAAATTCAAAGATACTGTTGATTTCGACGAAGCACTTGATGA
CATTATTGCAATATTGCCATACGATAAAAAAGTGGAAAACCAGTGGATGGAAAACGTTCCTGCAGTTCAGATGAAATCAA
AATTCAGTAAGGAATTAAGTTATTTAGCAGAAGATCTTGCTGAAGTCTACATCAAAAAAGACCTTGCCGCAGTTAGGGCT
TTAAAAGTAGCAAAAGAATTAAAAGATATGACATCTAAAAGACAGGATGTTGAAGAAGACGAATTTTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_31)

(5-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q6LWI8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value

References

[1] Dallas R Fonseca et al. (2023) Random transposon mutagenesis identifies genes essential for transformation in Methanococcus maripaludis. Molecular Genetics And Genomics : MGG 298(3):537-548. [PMID: 36823423]