Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   MKF36_RS01740 Genome accession   NZ_CP092750
Coordinates   329257..329421 (+) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain KS04AU     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 324257..334421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKF36_RS01735 (MKF36_01735) srfAB 326202..329192 (+) 2991 Protein_337 surfactin non-ribosomal peptide synthetase SrfAB -
  MKF36_RS01740 (MKF36_01740) comS 329257..329421 (+) 165 WP_269194677.1 competence protein ComS Regulator
  MKF36_RS01745 (MKF36_01745) srfAB 329343..334043 (+) 4701 Protein_339 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=659994 MKF36_RS01740 WP_269194677.1 329257..329421(+) (comS) [Bacillus velezensis strain KS04AU]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=659994 MKF36_RS01740 WP_269194677.1 329257..329421(+) (comS) [Bacillus velezensis strain KS04AU]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGATC
AGTAG

Domains


Predicted by InterproScan.

(9-52)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5