Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   OG395_RS37010 Genome accession   NZ_CP108390
Coordinates   8133415..8134491 (-) Length   358 a.a.
NCBI ID   WP_327246827.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01320     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 8128415..8139491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG395_RS36990 (OG395_36960) cobT 8129756..8130838 (-) 1083 WP_327246824.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase -
  OG395_RS36995 (OG395_36965) - 8130954..8131781 (-) 828 WP_327246825.1 class I SAM-dependent methyltransferase -
  OG395_RS37000 (OG395_36970) - 8131822..8133024 (-) 1203 WP_327246826.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase -
  OG395_RS37005 (OG395_36975) - 8133136..8133345 (+) 210 WP_030933634.1 hypothetical protein -
  OG395_RS37010 (OG395_36980) htrA 8133415..8134491 (-) 1077 WP_327246827.1 trypsin-like peptidase domain-containing protein Regulator
  OG395_RS37015 (OG395_36985) - 8134741..8135463 (-) 723 WP_327246828.1 class I SAM-dependent methyltransferase -
  OG395_RS37020 (OG395_36990) - 8135601..8136200 (-) 600 WP_327246829.1 DUF3043 domain-containing protein -
  OG395_RS37025 (OG395_36995) - 8136497..8137279 (+) 783 WP_266986503.1 PspA/IM30 family protein -
  OG395_RS37030 (OG395_37000) - 8137290..8137568 (+) 279 WP_327246830.1 hypothetical protein -
  OG395_RS37035 (OG395_37005) - 8137723..8138982 (+) 1260 WP_327246831.1 histidine kinase -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 36458.50 Da        Isoelectric Point: 6.4963

>NTDB_id=659937 OG395_RS37010 WP_327246827.1 8133415..8134491(-) (htrA) [Streptomyces sp. NBC_01320]
MDASHSRGRLYRLLLPLTAGVCAIALVSGCSDSDSASADATKSASPHPTSRAAGDLQAEYQTVIKNVLPSVVQIQAGNSL
GSGIVYDDKGHIVTNAHVVGQEKTFKVTVVTGEKVLGASLVATYPEQDLAVIKLDKVPSGLKAAKFGNSEKVEVGQIVLA
MGSPLGLSSSVTQGIVSAVGRTVSESREEGGTGATIANMVQTSAAINPGNSGGALVNLDSEVIGIPTLAATDPQMNGAAP
GIGFAIPVSMVKTVADQIIKSGKVTDSGRAALNITGRTVVDDNYQPFGIALVAVTPGGGADKAGLRVGDIVTKIDDTRIT
TMTALAETLADKKPGQKVKVTYLRNGVENTAVVTLGEI

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=659937 OG395_RS37010 WP_327246827.1 8133415..8134491(-) (htrA) [Streptomyces sp. NBC_01320]
ATGGATGCTTCCCACTCGCGCGGCCGTCTGTACCGGCTGCTGCTGCCTCTGACCGCAGGTGTCTGTGCCATAGCCCTGGT
GTCCGGCTGCTCGGACTCGGACTCGGCCAGCGCCGATGCCACGAAGTCGGCCTCGCCGCATCCGACTTCCCGGGCCGCAG
GTGACCTGCAGGCCGAGTACCAGACCGTCATCAAAAACGTGCTGCCCTCCGTGGTACAGATCCAAGCCGGCAACAGTCTC
GGATCCGGCATCGTCTACGACGACAAGGGCCATATCGTCACCAATGCCCATGTGGTCGGCCAGGAGAAGACGTTCAAGGT
CACCGTCGTCACCGGCGAGAAGGTGCTGGGCGCCTCGCTGGTCGCCACCTATCCGGAGCAGGACCTGGCCGTCATCAAAC
TCGACAAGGTACCGAGCGGGCTGAAGGCGGCGAAGTTCGGCAACTCGGAGAAGGTCGAGGTCGGTCAGATAGTGCTGGCG
ATGGGTTCGCCGCTCGGACTGTCCAGCAGCGTCACCCAGGGCATCGTGTCGGCGGTCGGCCGGACCGTCAGCGAGAGCCG
GGAGGAAGGTGGCACCGGGGCGACCATAGCGAACATGGTGCAGACCTCGGCGGCGATCAACCCGGGCAACAGCGGCGGTG
CGCTGGTGAACCTGGACAGTGAGGTGATCGGCATTCCGACGCTGGCGGCGACGGATCCGCAGATGAACGGCGCGGCACCG
GGCATCGGGTTCGCGATCCCCGTCTCGATGGTGAAGACGGTCGCCGACCAGATCATCAAGAGCGGCAAGGTCACCGACTC
GGGCCGGGCGGCGCTGAACATCACCGGCCGCACAGTCGTCGACGACAACTACCAGCCCTTCGGAATCGCGCTGGTCGCCG
TCACGCCCGGCGGAGGCGCGGACAAGGCCGGACTGCGGGTCGGCGACATCGTCACGAAGATCGACGACACACGGATCACG
ACGATGACGGCGCTGGCCGAGACGCTGGCCGACAAGAAGCCGGGCCAGAAGGTCAAGGTGACGTATCTGCGCAACGGTGT
GGAGAATACTGCGGTCGTCACTCTGGGCGAGATCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

34.896

100

0.374