Detailed information NTG0659813

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MKW31_RS02025
• Genome accession: NZ_CP092715
• Coordinates: 433576..434724 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 37-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 428576..439724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKW31_RS02005 (MKW31_02010)	-	428976..429659 (-)	684	WP_094032071.1	ABC transporter ATP-binding protein	-
MKW31_RS02010 (MKW31_02015)	-	429674..431110 (-)	1437	WP_199022337.1	ABC transporter permease	-
MKW31_RS02015 (MKW31_02020)	-	431323..432006 (+)	684	WP_007410267.1	response regulator transcription factor	-
MKW31_RS02020 (MKW31_02025)	-	431993..433414 (+)	1422	WP_195182934.1	HAMP domain-containing sensor histidine kinase	-
MKW31_RS02025 (MKW31_02030)	rapC	433576..434724 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
MKW31_RS02030 (MKW31_02035)	phrC	434708..434827 (+)	120	WP_064115825.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
MKW31_RS02035 (MKW31_02040)	-	434976..435071 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
MKW31_RS02040 (MKW31_02045)	-	435166..436530 (-)	1365	WP_199022338.1	aspartate kinase	-
MKW31_RS02045 (MKW31_02050)	ceuB	436944..437897 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
MKW31_RS02050 (MKW31_02055)	-	437887..438834 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
MKW31_RS02055 (MKW31_02060)	-	438828..439586 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=659813 MKW31_RS02025 WP_007410270.1 433576..434724(+) (rapC) [Bacillus velezensis strain 37-1]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=659813 MKW31_RS02025 WP_007410270.1 433576..434724(+) (rapC) [Bacillus velezensis strain 37-1]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568