Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   MKW31_RS01810 Genome accession   NZ_CP092715
Coordinates   371095..371493 (-) Length   132 a.a.
NCBI ID   WP_144664492.1    Uniprot ID   -
Organism   Bacillus velezensis strain 37-1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 366095..376493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKW31_RS01785 (MKW31_01785) - 366267..367469 (+) 1203 WP_064107758.1 GTP-binding protein -
  MKW31_RS01790 (MKW31_01790) - 367534..368670 (+) 1137 WP_007409359.1 zinc-dependent alcohol dehydrogenase -
  MKW31_RS01795 (MKW31_01795) - 368685..369119 (+) 435 WP_007409358.1 RDD family protein -
  MKW31_RS01800 (MKW31_01800) - 369191..369514 (+) 324 WP_007409357.1 YckD family protein -
  MKW31_RS01805 (MKW31_01805) - 369618..371054 (+) 1437 WP_042634804.1 family 1 glycosylhydrolase -
  MKW31_RS01810 (MKW31_01810) nin/comJ 371095..371493 (-) 399 WP_144664492.1 competence protein ComJ Regulator
  MKW31_RS01815 (MKW31_01815) nucA/comI 371514..371951 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  MKW31_RS01820 (MKW31_01820) hxlB 372309..372866 (-) 558 WP_327973281.1 6-phospho-3-hexuloisomerase -
  MKW31_RS01825 (MKW31_01825) hxlA 372863..373498 (-) 636 WP_095352416.1 3-hexulose-6-phosphate synthase -
  MKW31_RS01830 (MKW31_01830) - 373730..374092 (+) 363 WP_014304320.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14908.87 Da        Isoelectric Point: 4.7846

>NTDB_id=659810 MKW31_RS01810 WP_144664492.1 371095..371493(-) (nin/comJ) [Bacillus velezensis strain 37-1]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSLPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=659810 MKW31_RS01810 WP_144664492.1 371095..371493(-) (nin/comJ) [Bacillus velezensis strain 37-1]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTCATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCACTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75