Detailed information NTG0659788

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: AVFI_RS11205
• Genome accession: NZ_CP092712
• Coordinates: 2437235..2440615 (+)
• Length: 1126 a.a.
• NCBI ID: WP_155662803.1
• Uniprot ID: -
• Organism: Aliivibrio fischeri ATCC 7744 = JCM 18803 = DSM 507
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2432235..2445615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVFI_RS11185 (AVFI_11185)	erpA	2432643..2432984 (-)	342	WP_005420796.1	iron-sulfur cluster insertion protein ErpA	-
AVFI_RS11190 (AVFI_11190)	hemL	2433211..2434506 (+)	1296	WP_054775905.1	glutamate-1-semialdehyde 2,1-aminomutase	-
AVFI_RS11195 (AVFI_11195)	-	2434847..2435932 (+)	1086	WP_012533785.1	AI-2E family transporter	-
AVFI_RS11200 (AVFI_11200)	rsmC	2436050..2437069 (+)	1020	WP_012533401.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
AVFI_RS11205 (AVFI_11205)	chiS	2437235..2440615 (+)	3381	WP_155662803.1	response regulator	Regulator
AVFI_RS11210 (AVFI_11210)	-	2441237..2442910 (+)	1674	WP_017019173.1	ABC transporter substrate-binding protein	-
AVFI_RS11215 (AVFI_11215)	-	2443059..2444045 (+)	987	WP_012534180.1	ABC transporter permease	-
AVFI_RS11220 (AVFI_11220)	-	2444048..2445073 (+)	1026	WP_065595746.1	ABC transporter permease	-

Sequence

Protein

• Length: 1126 a.a.
• Molecular weight: 126745.01 Da
• Isoelectric Point: 5.8415

>NTDB_id=659788 AVFI_RS11205 WP_155662803.1 2437235..2440615(+) (chiS) [Aliivibrio fischeri ATCC 7744 = JCM 18803 = DSM 507]
MDKKQHFKRLQNTLMIAFLVLSITPLSLIAIFFLHSHSQDLATQSTAHLVSLRDNKEQQITNYFKGRKSEVLGFARSELA
NASGGRFYGLVSAFPHLGTSIEDARKNAQLRYITGSGDKIRTSVLPESDSYIGSERYRLLHKRYHWAYLELLKRSDFSDV
LLVDINGNVVYSKAKEDNYGTNLLTGKYKDSTLADTYKKIRTLMKKPESEDNIPIIFSDFNTINNETVAWFAAPIVQQGY
LHSFALFKLPNTGLIELIGDNTDTSSIKTNFVGQDSYSRISNEDIEKNLSENMKLALSGESNVGSFIDKHGEKVLAAFTS
INVDGHLWGLSLELPEKEAFARIQQLEQIFVIAMIIAIVCVVIASHFLSNSITAPLLRLTWAAERVSAGDLDQEMISTDR
KDEIGRLAVSFARMQRSIREKIQLIKDQNEELEANLATIQLKNNELEAADKLKDEFLATTSHELRTPLHGMVGIAEALYT
GANGPISASHRHQLEIIINSGQRLTSLVNDLLDYHKMRHGNLDINKHVTDLSSATSLVLELSQHLLGNKSIRIINQVDKS
LPVVFVDEQRLEQVLYNLIGNAIKYTSEGKIVISASVVDQFLRVQVVDTGHGIPADELEHIFEPLIQAGHDSNRYRQGSG
LGLSISRQLIELMGGSLYVSSQPMVGATFSFTLPLATKEQIQQHKLLAQEGITHYQTPEKLEYNLDEIDEELPENPEGPL
LLVADDEPVNLQVLTSFLKLEGYRVKVANDGPETLKVFEEEKPELLLLDVMMPGMSGYEVCQSLRETYSHSQLPIIMLTA
LNQTQDRIRGFESGANDYLSKPFNKQELAARIKAHLKASKAELFLSENDRLQQEIRHREKVEASLLETQAHILEQLNHAQ
EAIICAKSDGKIKYVNNSAAKLFQRTEEQLSRYSIDELIAKRSLIESKQNHRGNIDVYIDGEITQINADLLHLPAESGLS
LILVVSHKHEASEQRIHDLESAVEALSAFAFEGDKQKLNSLSLVGGDIAQLATKANENKEDKGTIMRELIVDGMISGLSY
WEESTGQTKYTLAEESGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVISTLEYILEHCEQYNDQRDKLVRIKDKLQ
ILISNN

Nucleotide

• Length: 3381 bp

>NTDB_id=659788 AVFI_RS11205 WP_155662803.1 2437235..2440615(+) (chiS) [Aliivibrio fischeri ATCC 7744 = JCM 18803 = DSM 507]
ATGGATAAAAAACAACACTTTAAACGTCTACAAAATACGTTGATGATTGCGTTTCTTGTTTTAAGCATAACGCCATTGTC
ACTTATTGCAATTTTCTTTCTTCACTCTCACAGCCAAGATCTTGCAACACAAAGTACCGCGCATCTTGTGTCATTACGAG
ATAACAAAGAACAACAAATTACAAATTACTTTAAAGGGCGTAAGTCCGAAGTATTAGGATTTGCTCGCTCTGAGCTAGCT
AATGCAAGTGGTGGTCGATTTTATGGTTTAGTTAGTGCGTTTCCACACTTAGGTACATCCATAGAAGACGCTCGTAAAAA
CGCACAACTGCGATATATCACAGGCTCTGGTGATAAAATTAGAACCAGTGTTCTTCCTGAATCAGACTCTTATATTGGTA
GTGAACGCTACCGTCTTTTACATAAACGTTACCATTGGGCATATTTAGAACTCTTAAAACGTTCAGACTTTAGTGACGTT
CTATTAGTTGATATTAATGGCAACGTTGTGTATTCCAAAGCCAAAGAAGACAATTATGGTACGAATTTATTAACAGGTAA
GTACAAAGACAGTACGTTAGCGGATACATATAAAAAGATCCGAACATTAATGAAAAAGCCTGAGAGCGAAGATAATATTC
CTATCATTTTTTCTGATTTCAATACCATAAATAACGAAACGGTAGCATGGTTTGCAGCTCCAATAGTACAGCAAGGTTAC
TTACATAGTTTTGCTCTATTCAAATTACCAAATACAGGTCTAATTGAATTGATTGGAGATAATACTGATACAAGTTCCAT
CAAAACCAACTTTGTAGGCCAAGACTCTTATTCCCGTATCAGCAATGAAGACATTGAAAAAAACCTCTCTGAAAATATGA
AGTTGGCGCTATCAGGTGAATCAAATGTCGGTAGCTTTATTGATAAGCACGGAGAAAAAGTGCTTGCCGCATTTACTTCT
ATTAATGTTGATGGACATTTATGGGGACTATCACTTGAACTTCCAGAAAAAGAGGCTTTTGCTCGCATTCAACAACTTGA
GCAAATCTTTGTTATTGCAATGATAATAGCCATTGTCTGTGTTGTTATTGCTTCGCATTTCTTATCTAACTCAATCACAG
CGCCACTTTTACGCTTAACATGGGCGGCAGAACGAGTATCTGCTGGTGATCTTGATCAGGAGATGATCAGCACGGATAGA
AAAGATGAAATTGGTCGCTTAGCAGTTAGTTTTGCACGAATGCAACGCTCAATAAGAGAAAAAATCCAACTAATTAAAGA
TCAAAATGAAGAACTTGAAGCTAACTTAGCTACCATTCAATTAAAGAACAATGAACTGGAAGCTGCTGATAAATTAAAAG
ATGAATTCTTAGCAACCACATCGCATGAGTTAAGAACACCACTACATGGTATGGTTGGCATCGCAGAAGCCTTATATACA
GGAGCCAACGGTCCAATATCGGCATCTCACCGCCATCAATTGGAGATAATTATAAATAGTGGTCAACGCTTAACAAGTCT
GGTTAATGACCTACTTGATTATCATAAAATGCGTCATGGTAACCTTGATATAAATAAGCATGTTACCGATCTATCCTCAG
CAACCAGTTTAGTTCTGGAGTTATCACAACACCTTCTTGGAAATAAATCCATTCGCATTATTAACCAAGTAGATAAATCA
TTACCTGTTGTTTTTGTCGATGAGCAACGACTTGAACAGGTTCTTTATAATCTTATTGGCAATGCGATTAAATATACATC
AGAAGGTAAAATTGTTATTTCAGCAAGTGTTGTAGATCAATTCTTGCGAGTTCAGGTCGTAGACACTGGGCACGGAATTC
CGGCAGATGAATTAGAACATATTTTCGAACCATTAATTCAAGCAGGTCATGATTCAAACCGCTATCGTCAAGGCTCAGGT
CTTGGTTTATCAATCAGTCGACAATTAATTGAATTAATGGGTGGCTCTTTATATGTAAGTAGCCAACCAATGGTAGGAGC
GACATTTAGCTTTACCCTTCCTCTTGCAACTAAAGAACAAATTCAACAACACAAATTGCTTGCTCAAGAAGGTATTACTC
ACTATCAAACACCTGAAAAACTTGAATATAATTTAGATGAGATTGATGAGGAATTACCAGAAAACCCTGAGGGTCCACTT
TTATTAGTTGCGGATGATGAGCCCGTTAATCTACAAGTACTTACTAGTTTCTTAAAACTCGAAGGCTACCGAGTGAAAGT
AGCTAATGATGGACCTGAAACATTAAAAGTATTTGAAGAAGAAAAGCCTGAATTATTATTGCTTGATGTCATGATGCCTG
GAATGAGCGGCTATGAAGTATGCCAATCATTAAGAGAGACTTATAGCCACTCTCAACTGCCTATTATTATGTTAACGGCC
TTAAATCAAACTCAAGATAGGATTCGAGGTTTTGAGTCAGGCGCTAACGACTATTTAAGTAAGCCTTTTAATAAACAAGA
ACTAGCAGCTCGAATAAAAGCGCATCTTAAAGCAAGTAAGGCTGAACTATTTTTAAGTGAAAATGATCGCCTACAGCAAG
AAATTCGCCATAGAGAAAAAGTGGAAGCCAGTTTGCTCGAGACACAAGCTCATATATTAGAGCAACTTAACCATGCACAA
GAGGCCATTATATGTGCCAAGAGTGATGGAAAAATTAAGTATGTAAATAACTCTGCAGCGAAACTATTTCAAAGAACAGA
AGAACAACTTTCACGTTACTCTATCGATGAGTTAATCGCTAAACGCAGCCTTATTGAAAGTAAACAAAATCACCGTGGCA
ATATTGATGTTTATATTGATGGTGAAATAACACAAATAAACGCTGATTTATTACATCTTCCTGCAGAGTCAGGGTTATCT
CTTATTCTTGTAGTTAGCCATAAACACGAGGCAAGCGAACAACGAATTCATGACTTAGAAAGTGCAGTAGAAGCACTATC
TGCATTTGCATTCGAAGGCGATAAACAAAAACTAAACTCGCTATCGTTAGTTGGTGGAGATATTGCGCAACTAGCCACTA
AGGCTAATGAAAATAAAGAAGATAAAGGCACCATCATGCGAGAGCTCATTGTTGACGGCATGATCTCAGGCCTTTCTTAT
TGGGAGGAGTCCACAGGGCAAACCAAATACACTCTCGCAGAAGAGAGTGGATTATGGCGAGTGTATTTAGATAGAAGCAC
ACTACAAACACGTACACTTGATAAATACTTACGAGTAGAAACCCTGCCGAAAACACCACGCTGGAGAACCGTAATTAGTA
CTTTAGAGTACATTTTAGAACATTGTGAGCAATACAATGACCAACGTGACAAACTAGTTAGAATTAAAGATAAGCTACAA
ATACTCATATCCAACAACTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (367-420)

• His Kinase A (phospho-acceptor) domain (HisKA) (453-520)

• Response regulator receiver domain (Response_reg) (722-833)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (567-676)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	63.709	100	0.638