Detailed information NTG0659682

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MKR81_RS14960
• Genome accession: NZ_CP092682
• Coordinates: 3249550..3250557 (+)
• Length: 335 a.a.
• NCBI ID: WP_005429951.1
• Uniprot ID: A0A0A3FEU3
• Organism: Vibrio campbellii strain IFL1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3244550..3255557

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKR81_RS14935 (MKR81_14935)	rplD	3244579..3245181 (-)	603	WP_005435074.1	50S ribosomal protein L4	-
MKR81_RS14940 (MKR81_14940)	rplC	3245199..3245828 (-)	630	WP_005435072.1	50S ribosomal protein L3	-
MKR81_RS14945 (MKR81_14945)	rpsJ	3245843..3246154 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
MKR81_RS14950 (MKR81_14950)	rpmE	3246627..3246845 (-)	219	WP_038890899.1	50S ribosomal protein L31	-
MKR81_RS14955 (MKR81_14955)	priA	3247142..3249343 (+)	2202	WP_240304777.1	primosomal protein N'	-
MKR81_RS14960 (MKR81_14960)	cytR	3249550..3250557 (+)	1008	WP_005429951.1	DNA-binding transcriptional regulator CytR	Regulator
MKR81_RS14965 (MKR81_14965)	-	3250726..3251277 (+)	552	WP_005429952.1	SPOR domain-containing protein	-
MKR81_RS14970 (MKR81_14970)	hslV	3251393..3251944 (+)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
MKR81_RS14975 (MKR81_14975)	hslU	3251974..3253305 (+)	1332	WP_079402061.1	HslU--HslV peptidase ATPase subunit	-
MKR81_RS14980 (MKR81_14980)	-	3253781..3254698 (+)	918	WP_047480383.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MKR81_RS14985 (MKR81_14985)	rraA	3254774..3255301 (+)	528	WP_005528529.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36912.44 Da
• Isoelectric Point: 6.1645

>NTDB_id=659682 MKR81_RS14960 WP_005429951.1 3249550..3250557(+) (cytR) [Vibrio campbellii strain IFL1]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDSAALCQFRHQGYQQALRRAGINKEEQYTVIADFSFDGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=659682 MKR81_RS14960 WP_005429951.1 3249550..3250557(+) (cytR) [Vibrio campbellii strain IFL1]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCGACGGTATCAAGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAGAGAGTGGAAGATGCCGTACTAGAAGCTGGTTATTCACCAAATTCATTAGCTCGTAACT
TACGCAGAAATGAATCAAAAACCATTGTCACCATCGTACCGGACATTTGCGACCCGTACTTCTCAGAGATCATTCGTGGT
ATTGAAGATGCAGCAATGGAACACGGCTATCTTGTTCTATTGGGCGACAGTGGTCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTTAACTTAGTCTTTACTAAACAAGCAGATGGTATGCTTTTGCTTGGTACTGATCTGCCGTTTGATGTCAGCAAGCCTG
AACAGAAAAACCTGCCACCTATGGTGATGGCGTGTGAATTTGCTCCAGAGTTGGAACTGCCAACCGTTCATATCGATAAC
CTAACCTCAGCCTTTGAAGCCGTGAACTACCTTACTCAGTTAGGTCACAAGCGTATTGCTCAGATCTCTGGCCCAGACTC
TGCTGCTCTGTGTCAGTTCCGCCACCAAGGTTACCAACAAGCTCTACGTCGTGCGGGTATTAATAAAGAGGAGCAATACA
CCGTTATTGCCGACTTCTCTTTTGACGGCGGAGTACAAGCCGTGCGTAAACTGCTTGAGCTTCCAGAGCCACCGACCGCT
CTATTCTGTCACTGTGACACCATGGCAATTGGTGCCATTCAAGAAGCGAAACGCCTAGGTTTGCGTATTCCTCAAGACCT
GTCCGTTGTCGGCTTTGATGACATTCAGTTCGCTCAATACTGCGATCCACCGCTAACCACCATCTCTCAACCTCGTTATG
AGATCGGTCGCCAAGCGATGTTGATGATGCTTGAATTGCTTAAAGGTCACGACGTACATTCTGGCTCTCGCCTACTCGAG
ACCAAACTTGTTGTGCGTGGCAGTGCAGCGCCACCGCCACTTCGATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A0A3FEU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	95.783	99.104	0.949
cytR	Vibrio cholerae C6706	90.964	99.104	0.901