Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   SMUNUM_RS02600 Genome accession   NZ_AP014571
Coordinates   501791..502831 (+) Length   346 a.a.
NCBI ID   WP_002264420.1    Uniprot ID   -
Organism   Streptococcus mutans LP13     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 496791..507831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNUM_RS02570 (SMNUM_0462) - 497054..497257 (+) 204 WP_002263011.1 hypothetical protein -
  SMUNUM_RS02575 (SMNUM_0463) - 497298..497543 (+) 246 WP_002267028.1 hypothetical protein -
  SMUNUM_RS02580 (SMNUM_0464) - 497739..498305 (+) 567 WP_019805348.1 TetR/AcrR family transcriptional regulator -
  SMUNUM_RS02585 (SMNUM_0465) - 498426..500201 (+) 1776 WP_019805349.1 oleate hydratase -
  SMUNUM_RS02590 (SMNUM_0466) rsmD 500784..501323 (+) 540 WP_002267337.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SMUNUM_RS02595 (SMNUM_0467) coaD 501313..501813 (+) 501 WP_002284962.1 pantetheine-phosphate adenylyltransferase -
  SMUNUM_RS02600 (SMNUM_0468) sepM 501791..502831 (+) 1041 WP_002264420.1 S16 family serine protease SepM Regulator
  SMUNUM_RS02605 (SMNUM_0469) - 502904..504235 (+) 1332 WP_019805350.1 metallophosphoesterase -
  SMUNUM_RS02610 (SMNUM_0470) - 504232..504780 (+) 549 WP_002268848.1 YutD-like domain-containing protein -
  SMUNUM_RS02615 (SMNUM_0471) rlmN 504777..505862 (+) 1086 WP_002264424.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SMUNUM_RS02620 - 505862..506398 (+) 537 WP_002262043.1 VanZ family protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37952.90 Da        Isoelectric Point: 10.1655

>NTDB_id=65964 SMUNUM_RS02600 WP_002264420.1 501791..502831(+) (sepM) [Streptococcus mutans LP13]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=65964 SMUNUM_RS02600 WP_002264420.1 501791..502831(+) (sepM) [Streptococcus mutans LP13]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAAGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGTTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCTCATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCCTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGCCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCCGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCTAAAAAATTAGGTACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(131-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.711

100

0.997

Multiple sequence alignment