Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG471_RS18890 Genome accession   NZ_CP108369
Coordinates   4424553..4425677 (+) Length   374 a.a.
NCBI ID   WP_114245192.1    Uniprot ID   A0ABY9IUC4
Organism   Streptomyces sp. NBC_01336     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4419553..4430677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG471_RS18875 (OG471_18900) - 4419969..4420808 (+) 840 WP_327171688.1 hypothetical protein -
  OG471_RS18880 (OG471_18905) - 4420879..4422831 (-) 1953 WP_327171689.1 hypothetical protein -
  OG471_RS18885 (OG471_18910) radA/sms 4423016..4424428 (+) 1413 WP_219572035.1 DNA repair protein RadA Machinery gene
  OG471_RS18890 (OG471_18915) disA 4424553..4425677 (+) 1125 WP_114245192.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG471_RS18895 (OG471_18920) - 4425874..4426698 (-) 825 WP_327171690.1 hypothetical protein -
  OG471_RS18900 (OG471_18925) - 4427037..4427939 (+) 903 WP_219575455.1 A/G-specific adenine glycosylase -
  OG471_RS18905 (OG471_18930) - 4428145..4428789 (+) 645 WP_219572036.1 SigE family RNA polymerase sigma factor -
  OG471_RS18910 (OG471_18935) - 4428912..4429553 (+) 642 WP_236065812.1 hypothetical protein -
  OG471_RS18915 (OG471_18940) cseB 4429564..4430268 (+) 705 WP_219572037.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40372.27 Da        Isoelectric Point: 4.9352

>NTDB_id=659613 OG471_RS18890 WP_114245192.1 4424553..4425677(+) (disA) [Streptomyces sp. NBC_01336]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=659613 OG471_RS18890 WP_114245192.1 4424553..4425677(+) (disA) [Streptomyces sp. NBC_01336]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAGGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTCGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACGCCTCGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGCGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCCCAGCGTCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACCGACGGCCGGCTCCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCGAAGCGTTCACGCACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTGTCCCACACCGAGCTGCTGGAACTCCCGGTCGTGGCAAGGGCGCTGGGCTACAGCG
GCTCCCCCGAGACGCTCGACTCGGCAGTGTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGACTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCGCGGGCACGCAGCGTGCGCGAGGGCCTGTCGCGACTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436